LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g03836	ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTTTAGCGATGATGAGAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGTAAATGAATTTATGTATGAAGAAGTTGGAGGGGAGGTTTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAATTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGAAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTACTAAATTTGTTCCTTTAATGCCTGCATATCATGGTTTGAGTGATGGCGACAAAGCCCAAGCTGATGTATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATCAAAAAGGAGGATATAGAAACGTTGGTTTTTCAATGAAAGATTTATACAACTACATAGATGAGATTAGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTATGTTCTGAGGATGGGAAACTCACTCATCTGTTTTGGTGTGATGAAATAA	879	0.3572	MDLNSDDSAVNLEDDRDLSYSDSSSFSDDENHNENDRVTDTEDEVNEEEVDTDEVNEFMYEEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYAKCHGFAVRRDDVIKDSKGMVIMRQFLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPTKFVPLMPAYHGLSDGDKAQADVLHSHGVRPCQIMGFLVDQKGGYRNVGFSMKDLYNYIDEIRRGKIKDGDAVAGLSYLQGKADNNPMFFSRFYVLRMGNSLICFGVMK.	293

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g03836	292	MobiDBLite	consensus disorder prediction	1	53	-	-
	Seca9g03836	292	MobiDBLite	consensus disorder prediction	9	39	-	-
	Seca9g03836	292	PANTHER	OS01G0519700 PROTEIN	81	276	-	-
	Seca9g03836	292	Pfam	FAR1 DNA-binding domain	92	182	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g03836	Seca-Chr9	74967319	74968197	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca9g03836		FAR1	2.8e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g03836	-		-	ccaj:109794460	273.478