Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03800 ATGCCCACTAACATTCATGTAACTTACATTGATGGGTTTGTTGGATATGAACATCACTTCAATGAAACCGAGTTGTCTTTGCTTGAAGCTCATGAAGCATCTTTATCCTATGAAGGGACTAATCAACTTCTGGTAGGACTCACCCTTATTCAAGATGCCACTGCTAAAGGAGCAGTGTGCTTGGATGGAACATTGCCTGGTTACCATTTGCATAGGGGATATGGATCAGAAGCAGACAGTTGGCTTATTAATTTAGAGGCGGTTTATGTTGGAGTGTGTAAGTTTTATTTAAGCTTTGAGTTGGAGAAGCATGAAACAACTTAG 324 0.4012 MPTNIHVTYIDGFVGYEHHFNETELSLLEAHEASLSYEGTNQLLVGLTLIQDATAKGAVCLDGTLPGYHLHRGYGSEADSWLINLEAVYVGVCKFYLSFELEKHETT. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03800 107 PANTHER NOTUM-RELATED 34 87 IPR004963 GO:0016787
Seca9g03800 107 Pfam Pectinacetylesterase 41 88 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03800 Seca-Chr9 72999018 73000162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03800 44 87 Carbohydrate Esterase AT1G57590 75.000 2.55e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03800 K19882 - gmx:100782401 131.339