Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g03789 | ATGTCTCTTCTACCCAGCCATTCCTTATTTAACATTCATTCTTATCCATCATTACACAGACAAAAGAAGAAACACAAGCCAAGTACTAAAATCATGATGCACAAAATAGAACCTTTTCTACTTTTGGTTATCCTCTCCATAGTTTCAGTTTCTTCCATCCCACCAGGCTCAACCCTTTATGCTTCAGACACAAGCCAAACATGGTCCTCTCCCAACAACACATTCACTCTGAATTTTCTACCTGTTCAACCCCCAACATCTCCTCCTTCCTTCATGGTTGGTATTGTCTACTCTGGTGCCGGTGGTGGCGCCTCCGTGGACTCCGGCGGCTCATTCAAGTTGCTCTCAGCTGGCAGCCTCCAACTTGTTAATGGCTCTGGCACCACAATATGGGACTCCGGAACTTCCCATCTGGGTGTCTCCTCTGCCTTCCTTGATGAGCAAGGCAACTTGGTTCTCTCTAATGGCACTAGTACCGTGTGGTCCAGTTTCAACTACCCAACTGATACCATTGTGGTGTCTCAAAACTTCACTCCTAATATGGTTTTACTATCTGGGTTGTATTCATTTAGGTTTCACTCTTTAGGTAATCTCATGCTTAGATGGAATGAAAGTGTTGTGTATTGGAGTCATGCCTTGAATGATTCTGCAAATGGGGCTTTAACTTTTCCTGTATTAGGATTGAAGCCCAAAGGGGTACTATCAGTTCATGATCCAAATTTGAAAAGGGAAGTCATTGTTGCCTTTAGCAGTGACCATGAAGAAGGAAGTGATGTTCTGAGAATTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAGTTCTTCAAAAGGAAGTGGAACTGCAATCATGAGGTGGGCTGCTTTGGAAGATCAATGTGAGGTTTTTGGATACTGTGGAAAGTATGGTATTTGTAGTTACAAGGACTCAGTTCCTATTTGTGGATGCCCATCTCAGAATTTTGAGATGATTGATCCAAATAATGGCAGGAAAGGGTGTAGGAGGAAGGTGAAGCTAGAGGATTGTCCTGGAAGGGTGGGAATGTTGCAATTGAACCATGCTCTTCTCTTGACTTACCCTCCTCTATTCTTGATTAACCCTGAGGTGTTGTATATTCCTATATCACCTTGTAAAGGAAATTGTCTAGCAACTGATTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACAGGATTGTGTTACCTAAAGACAACAGATTTTTTTAGTGGTTATCAGAGCCCTGCTGAACTCAGCACTTCATATATCAAGGTATGTCTACCACTGGCTACAAATCCAATTTCACTACCCGTTCCTGGGAAGGGAAATGATTGGAGATTACATGCTTGGATAGTAGTGGTACTTGTTTTAGGTACTCTTTTAGCTTTAATTGCCTTTCAGGGTGGTTTATGGTTTTGGTGTTGTAGAAATAGCCCAAGATTTGGAGGATTGTATGCTCATTATGCTCTCCTGGAGTATGCTTCTGGTACACCAGTTCAGTTCTCATACAAGGAGCTCCAAGGCTTAACAAATGGGTTTAAAGAGAAGCTTGGTGCTGGGAGATTTGGTTCAGTTTATATAGGAAAACTTGGTAATGGAACCATTGTTGCAGTTAAGAAACTTCAGGGAATTGAACAAGAAGAGAAACAATTTAAGTTGGAAATTGCTACCATGTGTAGTACTCACCATATAAATTTGGTGAGATTGATTGGTTTTTGCTCTGAAGGGCAACACAAGCTTTTGGTATATGAGTACATGAAAAATGGGTCTCTTGATAAGTTTCTCTTTGTGACAGAAGAGCAATCAGGAACATTGTTGGATTGGGAGTGTCGGTTCAATATTGCTCTGGGATCTGCAAGAGGTATCATGTACATTCATGAGGAGTGTCGAAATTGCATAGTCCATTGTAATATAAAACCTGAAAACATTCTTTTAGATGAGACTTTCAAGCCCAAAATCTCTGATTTTGGCCTTGTGAAACTCATAAGTCCTGAGGAAAACAGGTACCAAACCTTGTTAAATATGAGAGGAACCAAAGGGTATGTTGCTCCAGAGTGGCTTTCAAATCTTGTTGTAACTTCAAAATCTGATGTATACAGCTATGGTATGGTTTTACTAGAGATAGTGAGTGGAAGGAGGAACTTTGAAATCTCAAAAGAGACCAATAATAAAGAGTTCTCAATTTGGGCTTATGAAGAGTTTGAGAAAGGTAATATCATGGGCATTGTTGACAAAAGACTACCTGAACATGAAGTTAATTTGGATCAAGCAAGAAGGTTGATTCAAGTAAGCTTTAGGTGTATTCAGGAGCAACCATCTCAGAGGCCAGCAATAAGCAAAGTGTTACAAATGCTTGAAGGTGTTAGAAAGACTAATAGTATGTTTGGTTTACCCCAAAATCACATTTTAAACATGGATTCGAGCAAAGTGGTTCATTCCGTCTTTCCAAACAAAAGGTTTCTTCCCTTTGGCACTGAGGAGGAACATAAAGATGGAAACATTCATCCTTTTTATTGTCAGAAATATTGA | 2529 | 0.4017 | MSLLPSHSLFNIHSYPSLHRQKKKHKPSTKIMMHKIEPFLLLVILSIVSVSSIPPGSTLYASDTSQTWSSPNNTFTLNFLPVQPPTSPPSFMVGIVYSGAGGGASVDSGGSFKLLSAGSLQLVNGSGTTIWDSGTSHLGVSSAFLDEQGNLVLSNGTSTVWSSFNYPTDTIVVSQNFTPNMVLLSGLYSFRFHSLGNLMLRWNESVVYWSHALNDSANGALTFPVLGLKPKGVLSVHDPNLKREVIVAFSSDHEEGSDVLRILKLDGDGNLRIYSSSKGSGTAIMRWAALEDQCEVFGYCGKYGICSYKDSVPICGCPSQNFEMIDPNNGRKGCRRKVKLEDCPGRVGMLQLNHALLLTYPPLFLINPEVLYIPISPCKGNCLATDSCFASTSLSDGTGLCYLKTTDFFSGYQSPAELSTSYIKVCLPLATNPISLPVPGKGNDWRLHAWIVVVLVLGTLLALIAFQGGLWFWCCRNSPRFGGLYAHYALLEYASGTPVQFSYKELQGLTNGFKEKLGAGRFGSVYIGKLGNGTIVAVKKLQGIEQEEKQFKLEIATMCSTHHINLVRLIGFCSEGQHKLLVYEYMKNGSLDKFLFVTEEQSGTLLDWECRFNIALGSARGIMYIHEECRNCIVHCNIKPENILLDETFKPKISDFGLVKLISPEENRYQTLLNMRGTKGYVAPEWLSNLVVTSKSDVYSYGMVLLEIVSGRRNFEISKETNNKEFSIWAYEEFEKGNIMGIVDKRLPEHEVNLDQARRLIQVSFRCIQEQPSQRPAISKVLQMLEGVRKTNSMFGLPQNHILNMDSSKVVHSVFPNKRFLPFGTEEEHKDGNIHPFYCQKY. | 843 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g03789 | 842 | Gene3D | Transferase(Phosphotransferase) domain 1 | 586 | 803 | - | - | |
Seca9g03789 | 842 | ProSiteProfiles | Bulb-type lectin domain profile. | 44 | 166 | IPR001480 | - | |
Seca9g03789 | 842 | FunFam | serine/threonine-protein kinase PBS1-like | 486 | 585 | - | - | |
Seca9g03789 | 842 | Gene3D | - | 167 | 289 | IPR036426 | - | |
Seca9g03789 | 842 | PANTHER | OS07G0415500 PROTEIN | 39 | 789 | - | - | |
Seca9g03789 | 842 | SUPERFAMILY | Protein kinase-like (PK-like) | 494 | 786 | IPR011009 | - | |
Seca9g03789 | 842 | SMART | blect_4 | 59 | 167 | IPR001480 | - | |
Seca9g03789 | 842 | CDD | STKc_IRAK | 517 | 787 | - | - | |
Seca9g03789 | 842 | Pfam | S-locus glycoprotein domain | 244 | 318 | IPR000858 | GO:0048544 | |
Seca9g03789 | 842 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 49 | 166 | - | - | |
Seca9g03789 | 842 | ProSiteProfiles | Protein kinase domain profile. | 511 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g03789 | 842 | Pfam | D-mannose binding lectin | 108 | 179 | IPR001480 | - | |
Seca9g03789 | 842 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 100 | 211 | IPR036426 | - | |
Seca9g03789 | 842 | Gene3D | - | 48 | 166 | IPR036426 | - | |
Seca9g03789 | 842 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 167 | 289 | - | - | |
Seca9g03789 | 842 | PIRSF | SRK | 25 | 819 | IPR024171 | GO:0004674 | |
Seca9g03789 | 842 | Pfam | Protein kinase domain | 514 | 783 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g03789 | 842 | Gene3D | Phosphorylase Kinase; domain 1 | 486 | 585 | - | - | |
Seca9g03789 | 842 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 586 | 794 | - | - | |
Seca9g03789 | 842 | ProSitePatterns | Protein kinases ATP-binding region signature. | 517 | 540 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g03789 | Seca-Chr9 | 72642619 | 72645168 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g03789 | 484 | 787 | Receptor kinase-like Gene Family | AT5G20050 | 40.439 | 5.90e-69 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Seca9g03789 | Pkinase | 5e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g03789 | - | - | gmx:100810753 | 1014.99 |