Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03789 ATGTCTCTTCTACCCAGCCATTCCTTATTTAACATTCATTCTTATCCATCATTACACAGACAAAAGAAGAAACACAAGCCAAGTACTAAAATCATGATGCACAAAATAGAACCTTTTCTACTTTTGGTTATCCTCTCCATAGTTTCAGTTTCTTCCATCCCACCAGGCTCAACCCTTTATGCTTCAGACACAAGCCAAACATGGTCCTCTCCCAACAACACATTCACTCTGAATTTTCTACCTGTTCAACCCCCAACATCTCCTCCTTCCTTCATGGTTGGTATTGTCTACTCTGGTGCCGGTGGTGGCGCCTCCGTGGACTCCGGCGGCTCATTCAAGTTGCTCTCAGCTGGCAGCCTCCAACTTGTTAATGGCTCTGGCACCACAATATGGGACTCCGGAACTTCCCATCTGGGTGTCTCCTCTGCCTTCCTTGATGAGCAAGGCAACTTGGTTCTCTCTAATGGCACTAGTACCGTGTGGTCCAGTTTCAACTACCCAACTGATACCATTGTGGTGTCTCAAAACTTCACTCCTAATATGGTTTTACTATCTGGGTTGTATTCATTTAGGTTTCACTCTTTAGGTAATCTCATGCTTAGATGGAATGAAAGTGTTGTGTATTGGAGTCATGCCTTGAATGATTCTGCAAATGGGGCTTTAACTTTTCCTGTATTAGGATTGAAGCCCAAAGGGGTACTATCAGTTCATGATCCAAATTTGAAAAGGGAAGTCATTGTTGCCTTTAGCAGTGACCATGAAGAAGGAAGTGATGTTCTGAGAATTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAGTTCTTCAAAAGGAAGTGGAACTGCAATCATGAGGTGGGCTGCTTTGGAAGATCAATGTGAGGTTTTTGGATACTGTGGAAAGTATGGTATTTGTAGTTACAAGGACTCAGTTCCTATTTGTGGATGCCCATCTCAGAATTTTGAGATGATTGATCCAAATAATGGCAGGAAAGGGTGTAGGAGGAAGGTGAAGCTAGAGGATTGTCCTGGAAGGGTGGGAATGTTGCAATTGAACCATGCTCTTCTCTTGACTTACCCTCCTCTATTCTTGATTAACCCTGAGGTGTTGTATATTCCTATATCACCTTGTAAAGGAAATTGTCTAGCAACTGATTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACAGGATTGTGTTACCTAAAGACAACAGATTTTTTTAGTGGTTATCAGAGCCCTGCTGAACTCAGCACTTCATATATCAAGGTATGTCTACCACTGGCTACAAATCCAATTTCACTACCCGTTCCTGGGAAGGGAAATGATTGGAGATTACATGCTTGGATAGTAGTGGTACTTGTTTTAGGTACTCTTTTAGCTTTAATTGCCTTTCAGGGTGGTTTATGGTTTTGGTGTTGTAGAAATAGCCCAAGATTTGGAGGATTGTATGCTCATTATGCTCTCCTGGAGTATGCTTCTGGTACACCAGTTCAGTTCTCATACAAGGAGCTCCAAGGCTTAACAAATGGGTTTAAAGAGAAGCTTGGTGCTGGGAGATTTGGTTCAGTTTATATAGGAAAACTTGGTAATGGAACCATTGTTGCAGTTAAGAAACTTCAGGGAATTGAACAAGAAGAGAAACAATTTAAGTTGGAAATTGCTACCATGTGTAGTACTCACCATATAAATTTGGTGAGATTGATTGGTTTTTGCTCTGAAGGGCAACACAAGCTTTTGGTATATGAGTACATGAAAAATGGGTCTCTTGATAAGTTTCTCTTTGTGACAGAAGAGCAATCAGGAACATTGTTGGATTGGGAGTGTCGGTTCAATATTGCTCTGGGATCTGCAAGAGGTATCATGTACATTCATGAGGAGTGTCGAAATTGCATAGTCCATTGTAATATAAAACCTGAAAACATTCTTTTAGATGAGACTTTCAAGCCCAAAATCTCTGATTTTGGCCTTGTGAAACTCATAAGTCCTGAGGAAAACAGGTACCAAACCTTGTTAAATATGAGAGGAACCAAAGGGTATGTTGCTCCAGAGTGGCTTTCAAATCTTGTTGTAACTTCAAAATCTGATGTATACAGCTATGGTATGGTTTTACTAGAGATAGTGAGTGGAAGGAGGAACTTTGAAATCTCAAAAGAGACCAATAATAAAGAGTTCTCAATTTGGGCTTATGAAGAGTTTGAGAAAGGTAATATCATGGGCATTGTTGACAAAAGACTACCTGAACATGAAGTTAATTTGGATCAAGCAAGAAGGTTGATTCAAGTAAGCTTTAGGTGTATTCAGGAGCAACCATCTCAGAGGCCAGCAATAAGCAAAGTGTTACAAATGCTTGAAGGTGTTAGAAAGACTAATAGTATGTTTGGTTTACCCCAAAATCACATTTTAAACATGGATTCGAGCAAAGTGGTTCATTCCGTCTTTCCAAACAAAAGGTTTCTTCCCTTTGGCACTGAGGAGGAACATAAAGATGGAAACATTCATCCTTTTTATTGTCAGAAATATTGA 2529 0.4017 MSLLPSHSLFNIHSYPSLHRQKKKHKPSTKIMMHKIEPFLLLVILSIVSVSSIPPGSTLYASDTSQTWSSPNNTFTLNFLPVQPPTSPPSFMVGIVYSGAGGGASVDSGGSFKLLSAGSLQLVNGSGTTIWDSGTSHLGVSSAFLDEQGNLVLSNGTSTVWSSFNYPTDTIVVSQNFTPNMVLLSGLYSFRFHSLGNLMLRWNESVVYWSHALNDSANGALTFPVLGLKPKGVLSVHDPNLKREVIVAFSSDHEEGSDVLRILKLDGDGNLRIYSSSKGSGTAIMRWAALEDQCEVFGYCGKYGICSYKDSVPICGCPSQNFEMIDPNNGRKGCRRKVKLEDCPGRVGMLQLNHALLLTYPPLFLINPEVLYIPISPCKGNCLATDSCFASTSLSDGTGLCYLKTTDFFSGYQSPAELSTSYIKVCLPLATNPISLPVPGKGNDWRLHAWIVVVLVLGTLLALIAFQGGLWFWCCRNSPRFGGLYAHYALLEYASGTPVQFSYKELQGLTNGFKEKLGAGRFGSVYIGKLGNGTIVAVKKLQGIEQEEKQFKLEIATMCSTHHINLVRLIGFCSEGQHKLLVYEYMKNGSLDKFLFVTEEQSGTLLDWECRFNIALGSARGIMYIHEECRNCIVHCNIKPENILLDETFKPKISDFGLVKLISPEENRYQTLLNMRGTKGYVAPEWLSNLVVTSKSDVYSYGMVLLEIVSGRRNFEISKETNNKEFSIWAYEEFEKGNIMGIVDKRLPEHEVNLDQARRLIQVSFRCIQEQPSQRPAISKVLQMLEGVRKTNSMFGLPQNHILNMDSSKVVHSVFPNKRFLPFGTEEEHKDGNIHPFYCQKY. 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03789 842 Gene3D Transferase(Phosphotransferase) domain 1 586 803 - -
Seca9g03789 842 ProSiteProfiles Bulb-type lectin domain profile. 44 166 IPR001480 -
Seca9g03789 842 FunFam serine/threonine-protein kinase PBS1-like 486 585 - -
Seca9g03789 842 Gene3D - 167 289 IPR036426 -
Seca9g03789 842 PANTHER OS07G0415500 PROTEIN 39 789 - -
Seca9g03789 842 SUPERFAMILY Protein kinase-like (PK-like) 494 786 IPR011009 -
Seca9g03789 842 SMART blect_4 59 167 IPR001480 -
Seca9g03789 842 CDD STKc_IRAK 517 787 - -
Seca9g03789 842 Pfam S-locus glycoprotein domain 244 318 IPR000858 GO:0048544
Seca9g03789 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 49 166 - -
Seca9g03789 842 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03789 842 Pfam D-mannose binding lectin 108 179 IPR001480 -
Seca9g03789 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 100 211 IPR036426 -
Seca9g03789 842 Gene3D - 48 166 IPR036426 -
Seca9g03789 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 167 289 - -
Seca9g03789 842 PIRSF SRK 25 819 IPR024171 GO:0004674
Seca9g03789 842 Pfam Protein kinase domain 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03789 842 Gene3D Phosphorylase Kinase; domain 1 486 585 - -
Seca9g03789 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 794 - -
Seca9g03789 842 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03789 Seca-Chr9 72642619 72645168 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03789 484 787 Receptor kinase-like Gene Family AT5G20050 40.439 5.90e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca9g03789 Pkinase 5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03789 - - gmx:100810753 1014.99