Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03786 ATGCTGACACTGGAAGCCACCCTTTTGCTTTCTCTTCTCTCCACCATCTCAGTTGTTGCCATTTCACCAGGCTCAACCCTCTATGCTTCAGACACAAGCAAAACATGGTCATCTCCCAACAGCAGATTCTCTCTAAAGTTCCTTCCAGTCCAACCCAAAACATATCCTCCTTCCTTCATAATTGGTATTGTCTTCTTTGGAGGTGTCCCTATCATTTGGACAGCAGGTCACGGTGCCTCTGTGGACTACCAGGGCTCATTCCGGTTTCTCTCCACCGGCAATCTTCGCCTCGTTAACGGTTCCGGCACCGCCGTATGGGACTCCGGAACTTCCCATCTGGGTGTCTCCTCTGCCTTCCTTGATGATCAAGGCAACTTGATTCTCTCTAATGGCACCAGTACTATATGGTCCAGCTTTGACCATCCCACAGATACCATTATGCCGTCTCAGAACTTCAGAGTTGGTATGGTTTTGCAGTCTGGTTTGTATTCATTTAGGCTTGTTTCTTTGGGTAAGATAATGCTTAGATGGAATGATAGTGTGGTGTACTGGAATAAAAGAATTGATTTACCCATTGTTGGTCAAAGCAATGGCTATGCAGAAGGAAAAAGTGATGAGCTGAGAATTTTGAAGTTGGATAATGATGGGAATTTGAGGATCTATAGCTCCATTAGGGGTAGTGGATCTGCACAGATCACATGGGTTGCAATTGAAGATCAATGTGAGGTTTTTGGATATTGTGGAAATTATGGTATTTGTAGTTACCAGGATTCGGTTCCTGTTTGTGGATGCCCAACTCAGAATTTTGAAATGGTTGATCCAAATCATAGCAGGAAAGGGTGTAGGAGGAAAGTGAAATTAGAGGATTGTATAGAAAATGTAACTATGGCCACACTGGACAATACTATGCTCTTTCTTGAGGATGAGTTTTCAGAGAGTTTTTTTATTGGTATATCTGCTTGTAGAGGAAATTGCCTCTCAGGTTCAGTTGCTTGTTTTGGATCCACTTCATTACAAGATGGAACAGGAATTTGTTACATAAAAGTAACAGACTTTATCAGTGGTTATCGAAATCCAGCCATATCTAGCATTTCATTTATCAAGGTATGTGCACCAGTGGTTCTATCAAGCCCACCACTAGAGCCTGGGAAGGGAAAGGATCAGAGGATACATCATTGGATACCAATGGTAGTTTTAGGTACTCTTGTAGCTTTGATTGCCTTTCAAGCTGGTTTATGGTTATGGTGTAGAAGAAACAGCTCAAGATTTGGTGGAGTCTATAGTGAGTATGCTCTTTTGGAGTATGCTTCAAGTGCACCAGTCCAGTTTTCCTACAAGGAGCTGCAAGGCTTCACAAGTGGGTTTAAGGAGAAGCTTAGTGTTGGAAGATTTGGTTCTATTTATAGAGGAATTCTTGATAATGGAACTGTGGTTGCTGTTAAGAAACTTGAGGGAATTGAACATGAAGACAAACAATTTGGGTTGGAAATTGCTACCATATGCAGTACCCATCATTTGAATTTGGTGAGACTAATTGGTTTTTGCTGTGAAGGGCAAAACAGGCTTTTGGTATATGAGTTCATGAAAAATGGGAGTCTTGATAATTACCTTTTTGAAACTGAAGATTCAACATTGTTGAATTGGCAGTGTCGGTTCAACATTGCCCAGGGTTCTGCAAAGGGTATCAACTATCTTCATGAGGGGTGTCGAACTTGCATAGTACATGGTGACATAAAACCTGAAAACATTCATTTGGATGAGAATTACAAAGCCAAAATCTCAGATATTGGTCTTGTAAATCTCATGAATCCTAAGGACCACAGGTACAAAACCCTGTCAAATATGAGAGGAGCTAAAGGATATGAAGCTCCAGAGTTCCTTTCCAAATCAGATGTTTACAGCTATGGTGTGGTTTTGCTGGAAATTGTGAGTGGAAGAAGGAACTCTGAAATCTCAGAAGAAACATATAATAAAGATCTCTCAATTTGGGCATATCAAGAGTTTGAGAAAGGTAACATAAAGGGCATAGTTGACAAAAGACTACCTGAAAATGAAGTTAATTTGGAACAAGTGAGAAGGGTCATTCTGGCAAGCTTTTGGTGCATTCAGGAGCAACCAGACCTTCGACCAACGATGGGCAAGGTCTTGCAAATACTAGAAGGTATTATAGAGGCTGAGAAGCCACCTCCTCCAAAAACTGTGAATAAAGAATTTTTTAGTGCAATTGGGGAATGCTTGAGAAGCAATGTAAGAGATGTCTCCACTGTCCCAGCTTCAGCACCAACTTGCTCTGCCCCTTCATCTTCATCATTCCAGATTGAAGGTTTTTCTCATTTGGAATCAGAAGGGAACATGGAGAGTGAAATATCATCTCTTTAA 2379 0.4119 MLTLEATLLLSLLSTISVVAISPGSTLYASDTSKTWSSPNSRFSLKFLPVQPKTYPPSFIIGIVFFGGVPIIWTAGHGASVDYQGSFRFLSTGNLRLVNGSGTAVWDSGTSHLGVSSAFLDDQGNLILSNGTSTIWSSFDHPTDTIMPSQNFRVGMVLQSGLYSFRLVSLGKIMLRWNDSVVYWNKRIDLPIVGQSNGYAEGKSDELRILKLDNDGNLRIYSSIRGSGSAQITWVAIEDQCEVFGYCGNYGICSYQDSVPVCGCPTQNFEMVDPNHSRKGCRRKVKLEDCIENVTMATLDNTMLFLEDEFSESFFIGISACRGNCLSGSVACFGSTSLQDGTGICYIKVTDFISGYRNPAISSISFIKVCAPVVLSSPPLEPGKGKDQRIHHWIPMVVLGTLVALIAFQAGLWLWCRRNSSRFGGVYSEYALLEYASSAPVQFSYKELQGFTSGFKEKLSVGRFGSIYRGILDNGTVVAVKKLEGIEHEDKQFGLEIATICSTHHLNLVRLIGFCCEGQNRLLVYEFMKNGSLDNYLFETEDSTLLNWQCRFNIAQGSAKGINYLHEGCRTCIVHGDIKPENIHLDENYKAKISDIGLVNLMNPKDHRYKTLSNMRGAKGYEAPEFLSKSDVYSYGVVLLEIVSGRRNSEISEETYNKDLSIWAYQEFEKGNIKGIVDKRLPENEVNLEQVRRVILASFWCIQEQPDLRPTMGKVLQILEGIIEAEKPPPPKTVNKEFFSAIGECLRSNVRDVSTVPASAPTCSAPSSSSFQIEGFSHLESEGNMESEISSL. 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03786 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 185 IPR036426 -
Seca9g03786 792 PANTHER OS07G0415500 PROTEIN 7 731 - -
Seca9g03786 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 141 - -
Seca9g03786 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 528 729 - -
Seca9g03786 792 Gene3D - 18 141 IPR036426 -
Seca9g03786 792 Pfam Protein tyrosine and serine/threonine kinase 455 718 IPR001245 GO:0004672|GO:0006468
Seca9g03786 792 SUPERFAMILY Protein kinase-like (PK-like) 434 720 IPR011009 -
Seca9g03786 792 ProSiteProfiles Protein kinase domain profile. 453 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03786 792 Pfam D-mannose binding lectin 71 155 IPR001480 -
Seca9g03786 792 CDD STKc_IRAK 459 722 - -
Seca9g03786 792 PIRSF SRK 1 183 IPR024171 GO:0004674
Seca9g03786 792 PIRSF SRK 185 751 IPR024171 GO:0004674
Seca9g03786 792 Gene3D Phosphorylase Kinase; domain 1 426 527 - -
Seca9g03786 792 SMART blect_4 27 142 IPR001480 -
Seca9g03786 792 FunFam S-receptor-like serine/threonine-protein kinase 427 527 - -
Seca9g03786 792 SMART serkin_6 453 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03786 792 Pfam S-locus glycoprotein domain 199 265 IPR000858 GO:0048544
Seca9g03786 792 Gene3D Transferase(Phosphotransferase) domain 1 528 737 - -
Seca9g03786 792 ProSiteProfiles Bulb-type lectin domain profile. 18 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03786 Seca-Chr9 72449285 72451663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03786 375 730 Receptor kinase-like Gene Family AT5G38280 37.127 1.57e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca9g03786 PK_Tyr_Ser-Thr 4.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03786 - - cam:101506838 937.176