Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03768 ATGGCTCAGTCTCCTTCTGCTTCTGCAAAGACCAAAGACATTGCTTCCTCCCTTCATGTAGAGGAGGCTGCACAACCCCAACCCAGCCCACTGCGCAAGATGATCGCTGTGGCATCTATCGCCGCCGGCATACAATTTGGGTGGGCCCTACAACTCTCCCTCCTGACCCCATACGTCCAACTGCTGGGCGTCCCACACAAATGGTCTTCCTTCATTTGGCTCTGTGGCCCCATCTCCGGCTTGCTCGTCCAGCCCATCGTCGGTTATTCCAGTGACCGCTGTACCTCCCGCTTTGGCCGCCGTCGCCCTTTCATCTGCGCCGGCGCCGTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCTGCCGACCTCGGCTATGCCTTCGGCGATGACGTCACCAAGAAAACCCGCCCTCGTGCCGTCACCATTTTCGTCATCGGCTTCTGGATCCTCGACGTTGCCAATAACATGCTCCAGGGACCCTGTCGCGCCTTCCTCGGCGACCTTGCCGCCGGCGACCACCGGAAAACCCGAACCGCCAACGCCTTCTTCTCTTTCTTCATGGGCGTTGGCAACGTCCTTGGCTACGCGGCGGGTTCCATCAACGGCCTCCACCGAGTTTTCCCCTTCACGGAGACAAAGGCCTGTGACGTGTTCTGCGCGAACCTCAAGAGCTGTTTCTTCTTCTCAATCTTGCTCCTTCTCGTCCTCTGCTCCATCGCGCTCAGTTATGTAAAAGACATGCCGATCACATCGCGCGATGATATTGATGAGGAAAAAGTGGTTTCTTGCTTTGGGGAGTTGTTCGGTGCGTTTAAGGGACTGAAGAGGCCCATGTGGACACTGATGCTGGTGACGGCTCTTAACTGGGTTGCGTGGTTCCCTTTCATCTTATTCGACACTGACTGGATGGGGCGTGAGGTGTATGGTGGAAAGGCAGGGGAGAAGGCTTACGATGCTGGGGTTCACGCTGGTTCGTTGGGGCTCTTGCTCAATGCGGTCGTGCTTGGTGCCATGTCATTGGTGGTGGAGCCTTTGGGGCGTTTCGTTGGTGGAGTTAAGAGGCTCTGGGGGATCGTTAATTTCATTCTCGCCATTTGCATGGCAAGTACAGTACTCATAACTAAGGTGGCTCAGCACGAGCGCCACGTGACTGCCGGTGCCTCCGTCGGGGATCCCTCCGATGGGGTTAAGGCTGGTGCCTTGATTTTCTTTGCCGTCCTCGGAGTCCCGTTTGCGATTACTTTTAGCGTCCCATTTGCTCTTGCATCTATTTACTCCAGCACATCAGGGGCAGGACAAGGTTTATCTTTGGGAGTCCTCAATATTGCAATTGTGGTTCCACAGATGATAGTATCAGCAATAAGTGGACCGTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCAGCGTTCGTGGTGGGTGCTGTGATGGCCGCTGTCAGTGCCATATTGGCAATTGTGTTGCTGCCGACACCGAAGCCGGCCGATATGGCCAGGGCTTCAATCGCAACCACAGGTGGTTTTCATTAA 1533 0.5577 MAQSPSASAKTKDIASSLHVEEAAQPQPSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQLLGVPHKWSSFIWLCGPISGLLVQPIVGYSSDRCTSRFGRRRPFICAGAVAVAIAVFLIGYAADLGYAFGDDVTKKTRPRAVTIFVIGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMGVGNVLGYAAGSINGLHRVFPFTETKACDVFCANLKSCFFFSILLLLVLCSIALSYVKDMPITSRDDIDEEKVVSCFGELFGAFKGLKRPMWTLMLVTALNWVAWFPFILFDTDWMGREVYGGKAGEKAYDAGVHAGSLGLLLNAVVLGAMSLVVEPLGRFVGGVKRLWGIVNFILAICMASTVLITKVAQHERHVTAGASVGDPSDGVKAGALIFFAVLGVPFAITFSVPFALASIYSSTSGAGQGLSLGVLNIAIVVPQMIVSAISGPWDALFGGGNLPAFVVGAVMAAVSAILAIVLLPTPKPADMARASIATTGGFH. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03768 510 Gene3D MFS general substrate transporter like domains 27 490 IPR036259 -
Seca9g03768 510 NCBIfam sucrose/proton symporter 30 494 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca9g03768 510 PANTHER SUGAR TRANSPORTER 30 489 - -
Seca9g03768 510 CDD MFS_SLC45_SUC 34 487 - -
Seca9g03768 510 FunFam Sucrose transport protein 28 490 - -
Seca9g03768 510 MobiDBLite consensus disorder prediction 1 25 - -
Seca9g03768 510 Pfam MFS/sugar transport protein 37 293 - -
Seca9g03768 510 SUPERFAMILY MFS general substrate transporter 32 495 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03768 Seca-Chr9 70017307 70020316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03768 10 510 Sucrose Transporter Gene Family AT1G22710 65.619 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03768 K15378 - gmx:100782007 762.296