Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03744 AATTACACGTTAATAGCTATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTAAAAGAAGCTGTTAAGACTTGTTTAGAAGCTGGGATTACCGTTAGAATGGTAACTGGTGACAACATAAATACTGTTAAAGCGATTGCTAGAGAATGTGGCATCTTGACAGATGGATTGGTGATAGAGGGACCAGATTTCCAGAAAAAGACCCAGCGAGAAATGGAAGAGATAATACCAAAAATACAGGTAATGGCTCGATCCTTGCCTCTTGACAAGCACACCTTAGTGACCCATTTGAGGAATGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATAGGTATTGTTGGGACTAAGGTTTGTCACAGGCACAATCCATGCATCATTTATCATCCATCTAAGAATATGTACCATTATCTTCTTGCTTTGTATCTTCAATTGAATGCCCAACTATGGAATAGGACCACCCTTAGGCACATTTAG 525 0.4076 NYTLIAIIGIKDPVRPGVKEAVKTCLEAGITVRMVTGDNINTVKAIARECGILTDGLVIEGPDFQKKTQREMEEIIPKIQVMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAIGIVGTKVCHRHNPCIIYHPSKNMYHYLLALYLQLNAQLWNRTTLRHI. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03744 174 PRINTS P-type cation-transporting ATPase superfamily signature 6 17 - -
Seca9g03744 174 PRINTS P-type cation-transporting ATPase superfamily signature 28 38 - -
Seca9g03744 174 PRINTS P-type cation-transporting ATPase superfamily signature 108 127 - -
Seca9g03744 174 Gene3D - 1 144 IPR023214 -
Seca9g03744 174 PANTHER CATION TRANSPORTING ATPASE 1 137 - -
Seca9g03744 174 Pfam haloacid dehalogenase-like hydrolase 4 122 - -
Seca9g03744 174 SUPERFAMILY HAD-like 2 145 IPR036412 -
Seca9g03744 174 FunFam copper-transporting ATPase 1 isoform X2 8 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03744 Seca-Chr9 64155550 64156158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03744 2 143 Primary Pumps ATPases AT4G37640 72.727 1.79e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03744 K01537 - gmx:100801260 234.572