Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03681 ATGGGTTCGATGGGTAATAACCGTCATGGGGTGAACTTCTCAACCCAGAGGGATTTTTCAACGAAACTGAAATCTGGTTTGAAAGAAACGTTCTTCCCTGATGATCCATTCAAGCAGTTCAAGGAAGAGGATAATCCTTCACGTAGGGTCATCAAAGGGGTGCAGTACTTCATCCCAATTTTCGAGTGGCTTCCCAATTACTCTTGGCGCATCTTTTGGTCTGACTTAATCGCTGGTCTCACCATCTCCAGCCTCGCCATCCCTCAAGGCATTAGTTATGCCAAACTTGCCAACCTTCCTCCCCTCATTGGCCTTTATTCAAGCTTTGTGCCACCTCTGGTGTATGCTATATTTGGGAGCTCTAGGCACATGGCGGTGGGGACGATAGCAGCAGCATCATTGCTTATAGGTCAAACAATATCAAGCGTGGCAGACCCAGAAGCAGACCCAACGTTATATCTTCACTTGATTTTCACAACCACCTTTATCACCGGAGTTTTCCAGGCTTGCTTGGGTTTTTTCAGGCTAGGGATATTGGTGGATTTCTTTTCCCATTCTACCATCACTGGCTTCATGGGAGGGACAGCAATAATTCTCATCCTCCAGCAACTCAAGGGCATATTTGGCATGAAACATTTTTCAACCAAAACCAACCTTGTAGCAGTTGTGAAAGCCATCATCGTCAATAGACATGAGATAAGGTGGGAACCCACAGTTCTTGGAGTGATCTTACTTGCTTTCCTGCAATTTACCAGGCACGTGAGGAATAGGAAACCAAAACTCTTTTGGGTGTCAGCTATAGCTCCAATGACGACTGTAATAGTTGCTGGCATTTTCACGTACCTTGTCAAGGGCCAACATCATGGAATACAAATTGTGGGGCATCTAGATAAAGGATTGAATCCTTTGTCCATCCAGTATTTGAACTTCAATGGTAAATACTTATCAGCAGTGATGCGAGCTGGCCTTATCACAGGGGTCTTATCACTGGCGGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTTACTGATAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGCCTTATGAACTTATTTGGTTCTTTTACTTCATGTTACTTGACTAGTGGACCATTTTCCAAGACGGCTGTGAATTACAATGCAGGGTGTAAGACTGCCATGACAAACGTGGTACAGGCAATAGTAATGGCACTCACACTACAATTTTTGGCACCACTATTTGGCTACACCCCTATTGTTGCTCTATCAGCTATTATTATATCTGCCATGGTGGGTCTGATTAATTATCATGAAGTTATCTATCTCTTTAAAGTGGACAAGTTTGATTTTGTCATTTGCATGGCTGCTTTACTTGGAGTCACCTTTATAAGCATGGATGTTGGCCTCATGATCTCTGTTGGACTCGGTTTGCTTAGAGGACTGTTATATGTGGCTAGACCAGCAACATGCAAGCTTGGAAAGTTACCTGATTCTTGTTTATATAGAGATGTTGAACAATATCCTGCTTCAACATACCCTGGAATTATAGTTGTACAACTTGGTTCTCCCGTTTACTTTTCAAATGCTTTGTATGTCAAAGAAAGGTAA 1599 0.4271 MGSMGNNRHGVNFSTQRDFSTKLKSGLKETFFPDDPFKQFKEEDNPSRRVIKGVQYFIPIFEWLPNYSWRIFWSDLIAGLTISSLAIPQGISYAKLANLPPLIGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIGQTISSVADPEADPTLYLHLIFTTTFITGVFQACLGFFRLGILVDFFSHSTITGFMGGTAIILILQQLKGIFGMKHFSTKTNLVAVVKAIIVNRHEIRWEPTVLGVILLAFLQFTRHVRNRKPKLFWVSAIAPMTTVIVAGIFTYLVKGQHHGIQIVGHLDKGLNPLSIQYLNFNGKYLSAVMRAGLITGVLSLAEGIAIGRSFSVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMTNVVQAIVMALTLQFLAPLFGYTPIVALSAIIISAMVGLINYHEVIYLFKVDKFDFVICMAALLGVTFISMDVGLMISVGLGLLRGLLYVARPATCKLGKLPDSCLYRDVEQYPASTYPGIIVVQLGSPVYFSNALYVKER. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03681 532 PANTHER SULFATE TRANSPORTER 18 532 IPR001902 GO:0016020|GO:0055085
Seca9g03681 532 NCBIfam sulfate permease 59 531 IPR001902 GO:0016020|GO:0055085
Seca9g03681 532 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Seca9g03681 532 Gene3D STAS domain 483 532 IPR036513 -
Seca9g03681 532 Pfam Sulfate permease family 72 453 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03681 Seca-Chr9 60148571 60154187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03681 9 532 Inorganic Solute Cotransporters AT5G19600 64.190 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03681 K17471 - gmx:100789107 844.728