Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03673 ATGGACGACATGGAAGATGACGCGAGGTACCCTCCCAAGTCCTTCACTTTGAATCGCCAAAACCCTTCCCTTCGCCAAAAACACCCAATTCGAGGTACCCCATATCACCGATCAGCGACCACTCGCTACGAGGAGGATGACGATGAAGACGAGGAACCCGAGGAATTCAACGATTACGACGACGAGGAAGACGACGACAACGAAGGGGAAAATGGGTATGGCGGGAATTTCGAAGACGATGACGGGTTCTTGAGGAACCAGAAGAAGAGGAAGGTACGAGGTGGTTCCTCCTCTGTTTCTAACTACGAGTTCGCGCCACGCGCCGCGAAATTCTCGTACGGGAATCGTAGTTCTGAGGAATGGACGGAGCATGCAACGTTTGTGCTGTTGGAGGTGTGGGGAGACAAGTTCCTTCAACTTGGGAGGAACAGTTTGAGGTCTGAGGAATGGCACGAGGTGGCTGAAAAGGTGTCTGAGGAGTTGAAGGTGGAAAGGACGGTGCCACAGTGTAGGAGTGTTTTAGATAAGCTGAAAAGGAGGTACAAGAAAGAGAAGTCTCGAATGGATGAAATGGGTTTGGGTGTGAATTCTTCTAAGTGGGCTTTTTTTAAGAAGATGGATATGTTGATGTCTTCATCTGCAAGGCAAGAGTATGGACTTGCTTGTGGGGTTGATTCTGGTGAATATGTGTTTATGAATACAAGGGTCTATTTGAATAGGTCTAATGGATTTGATGAGATGAGGGATAGTCCTGGTGAGTCTGAGACCTCTGGGGATGATGATTCTGATGGGCTTGCAGGGGAATCTGGGGGTGGTGCTGGTGGTGGTGATGAGGAGGAGGATGAGGAGGATGAAACTTCCTTTAGGGTGCTGGCTGATTCTATTCAGAAGTTTGGGAAAATATATGAGAAGATTGAGAATACTAAGAGGCAGCAGATGATGGAATTGGAGAAGATGAGGTTGGATTTTAATAGAGAGTTGGAGCTGCAGAAAAAGCAGATTTTGGAAAGGGCTCAGGCTGAGATTGCAAAAATACAGGATGGAGATGAGGAGGATTCGGACTCTTCTGCTGAGAATCTCAGTGAATAA 1089 0.4747 MDDMEDDARYPPKSFTLNRQNPSLRQKHPIRGTPYHRSATTRYEEDDDEDEEPEEFNDYDDEEDDDNEGENGYGGNFEDDDGFLRNQKKRKVRGGSSSVSNYEFAPRAAKFSYGNRSSEEWTEHATFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKVERTVPQCRSVLDKLKRRYKKEKSRMDEMGLGVNSSKWAFFKKMDMLMSSSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESETSGDDDSDGLAGESGGGAGGGDEEEDEEDETSFRVLADSIQKFGKIYEKIENTKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQDGDEEDSDSSAENLSE. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03673 362 Coils Coil 302 344 - -
Seca9g03673 362 MobiDBLite consensus disorder prediction 44 75 - -
Seca9g03673 362 MobiDBLite consensus disorder prediction 342 362 - -
Seca9g03673 362 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 113 349 IPR044823 -
Seca9g03673 362 MobiDBLite consensus disorder prediction 243 289 - -
Seca9g03673 362 Gene3D - 121 183 - -
Seca9g03673 362 Pfam Myb/SANT-like DNA-binding domain 119 208 IPR044822 -
Seca9g03673 362 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03673 Seca-Chr9 59197798 59201761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03673 121 353 Trihelix Transcription Factor Family AT1G54060 29.368 7.53e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca9g03673 Myb_DNA-bind_4 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03673 - - gmx:100790166 431.795