Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03661 ATGGCTTTTGATTATGGTCCATGGCCTCGCATGCCCGGCGTTGAGAGAGCAAGAATTATGATGAAATGGGCAGAGTTAATTGATCAAAACATAGAAGAAATAGCAGCATTAGATGCCATTGATGCTGGAAAGTTGTATCATCGGTGCAAGGCTATTGAAATTCCATCAGCAGCAAATACTATACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAACCTTCTCGTGAGTTGCATGCATATACTTTGTTAGAACCAATTGGTGTTGTGGGGCATATCATTCCCTGGAATTTTCCCAGCTCCATGTTTGTGACCAAGGTTAGCCCTTCCCTGGCTGCTGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCAGCTTTGTTCTATGCTCATCTAGCTAAGTTGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCCAAATTGCAGGTGCTGCAATAAGCTCCCACATGGATATTGATAAGGTCAGCTTTACTGGTTCAACAGAAATAGGCAGAGAAATAATGCAAGCTGCTGCTAGGAGTAATCTGAAAACAGTTTCACTTGAACTAGGAGGCAAGTCACCACTTTTAATATTTGATGATGCTGATGTGGATAAAGCTGTTGAGCTTGCTCTCTTGGGGGTAGTGTATAACAAGGGAGAAATTTGTGTTGCTTGTTCGCGTGTATTTGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAACAATTTGAGAAAATTCTTTCCTATATTGAACATGGAAAAAGAGAAGGGGCCACCCTTCTGACAGGTGGCAAAAGAGTGGGTAACAAGGGCTACTACATTGAGCCTACAATTTTCTCTAATGTCAAGGAGGACATGCTTATTGCACAAGATGAAATATTTGGTCCTGTGATGGCCCTGATGAAGTTTAAGACCATGGAGGAAGCAATTAAAAGTGCTAACAACACCAGATATGGCTTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCGAACACTGTGTCAAGGTCAATTCGTGCTGGCATTATTTGGATCAACTGTTATTTTGCCTTTGGAAATGACATTCCTTATGGAGGTTATAAGATGAGTGGATTTGGAAGAGAGTTTGGAATGGAAGCCCTTTACAAATACTTACAAGTTAAATCTGTTGTAACACCCATTTACAATTCTCCTTGGCTTTGA 1302 0.4194 MAFDYGPWPRMPGVERARIMMKWAELIDQNIEEIAALDAIDAGKLYHRCKAIEIPSAANTIRYYAGAADKIHGEVLKPSRELHAYTLLEPIGVVGHIIPWNFPSSMFVTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQIAGAAISSHMDIDKVSFTGSTEIGREIMQAAARSNLKTVSLELGGKSPLLIFDDADVDKAVELALLGVVYNKGEICVACSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFKTMEEAIKSANNTRYGLAAGIVTKSLDTANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGREFGMEALYKYLQVKSVVTPIYNSPWL. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03661 433 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 199 206 IPR029510 GO:0016491
Seca9g03661 433 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 423 - -
Seca9g03661 433 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 227 238 IPR016160 GO:0016491
Seca9g03661 433 FunFam Aldehyde dehydrogenase3 203 392 - -
Seca9g03661 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 421 IPR016162 GO:0016491
Seca9g03661 433 FunFam Aldehyde dehydrogenase, putative 395 421 - -
Seca9g03661 433 Pfam Aldehyde dehydrogenase family 7 423 IPR015590 GO:0016491
Seca9g03661 433 SUPERFAMILY ALDH-like 5 429 IPR016161 GO:0016491
Seca9g03661 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 203 392 IPR016163 GO:0016620
Seca9g03661 433 FunFam Aldehyde dehydrogenase 1 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03661 Seca-Chr9 58210057 58220380 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03661 2 433 Aldehyde Dehydrogenase Gene Family AT3G24503 73.441 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03661 K12355 - gmx:100783920 800.816