Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03660 ATGTGCTTTTTAATGGATCCCCAACTTGGAAAGAAACTCTGTTATGTCCAATTTCCAAGAAGGTTTGATGGCATTGATTGCAATGATAGATATGCTAATCGCAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGTCCAATATATGTTGGAACTGGATGTGTGTTCAACAGACAAGCATTAAATGGCTATAAGCCACCATATGAGAAAAGCTTTTAA 234 0.359 MCFLMDPQLGKKLCYVQFPRRFDGIDCNDRYANRNTVFFDINMKCLDGIQGPIYVGTGCVFNRQALNGYKPPYEKSF. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03660 77 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 72 IPR029044 -
Seca9g03660 77 Pfam Cellulose synthase 1 75 IPR005150 GO:0016020|GO:0016760|GO:0030244
Seca9g03660 77 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03660 Seca-Chr9 58145099 58145810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03660 1 72 Cell Wall Biosynthesis AT5G17420 87.500 3.57e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03660 K10999 - gmx:100777278 150.214