Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03657 ATGGCAAATCTCAGCAATGGCCACAGCCACATAAACTCCTTTGTCAAGATTCCAAAAGTCAAGTTTACCAAGCTTTTCATCAATGGAGAATTTGTGGATTCAGTTTCAGGAAAAACGTTTGAGAGTGTTGATCCAAGAACAGAGGAAGTGATAACAGAAATAGCAGAGGCTAACAAAGAAGATGTCGATATTGCTGTGAGGGCCGCACGTAAGGCATTCGATTCTGGTCCATGGCCACGCATGCCCGGTGCTGCGAGAGCAAAGATTATGCTGAAGTGGGCAGAGCTAATTGAACAGAACCTAGAAGAAATTGCAGCATTAGATACAATTGATGGGGGGAAGCTATATAGTTGGTGTAAGGGTGTGGATGTTCCTGAAGCAGCCAATATCCTGCGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGATGTATTCAAAACATCCAGAGACCTTCATTTGTATACACTGATGGAACCTATTGGAGTTGTTGGACACATTATCCCTTGGAATTTTCCCACCATTATGTTCTTTGCTAAGGTCAGCCCTGCCTTGGCTGCTGGCTGCACCATGGTCCTTAAGCCTGCTGAACAAACACCTCTCTCCTCACTCTTTTATGCTCATCTTGCTAAGGAGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAGTTGCTGGGGCTGCAATAGCCTCACATATGGACATTGATACGATTAGTTTCACAGGTTCAACAGAAACAGGTCGTCAAGTAATGAAGGCTGCGGCCATGAGCAATTTGAAACCTGTTTCACTTGAATTAGGAGGCAAGTCACCAGTCTTGATTTTTGATGATGCTGATGTTGACAAAGCTGTTGACCTTGCTCTCTTTGGCATCCTACACAACAAGGGAGAAATCTGTGTTGCATTTTCCAGAGTTTTTGTCCAGGAAGGGATTTATGATGAATTTGAGAAGAAGGTGGTGGAGAAGGCAAAAACATGGGTAGTGGGGGACCCTTTTGATCCCAAAGTTCAGCAAGGACCCCAGACTAGTATGGCACAATTTGATAAAATTCTTTCCTATATTGAGCATGGAAAGAATCAAGGAGCCACATTATTGACTGGGGGTAAGCCAGTGGGAAACAAAGGATATTACATTGAGCCTACTATTTTCACAAATGTTAAGGAGGACATGCTAATAGTACAAGATGAAATATTTGGACCTGTAATGGTACTCTCTAAGTTCAAGACCGTTAAGGAAGCAATTGAGAAAGCCAACAACAGTAGATATGGTCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTGCCAACACTGTCTCTAGGTCCATCCGTGCAGGCATTATTTGGATTAACTGCTTCTTTGCCTTTGATATTGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCCTGGCTATGA 1512 0.4299 MANLSNGHSHINSFVKIPKVKFTKLFINGEFVDSVSGKTFESVDPRTEEVITEIAEANKEDVDIAVRAARKAFDSGPWPRMPGAARAKIMLKWAELIEQNLEEIAALDTIDGGKLYSWCKGVDVPEAANILRYYAGAADKIHGDVFKTSRDLHLYTLMEPIGVVGHIIPWNFPTIMFFAKVSPALAAGCTMVLKPAEQTPLSSLFYAHLAKEAGIPDGVLNVVPGFGSVAGAAIASHMDIDTISFTGSTETGRQVMKAAAMSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSMAQFDKILSYIEHGKNQGATLLTGGKPVGNKGYYIEPTIFTNVKEDMLIVQDEIFGPVMVLSKFKTVKEAIEKANNSRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03657 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Seca9g03657 503 FunFam Aldehyde dehydrogenase, putative 465 491 - -
Seca9g03657 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Seca9g03657 503 FunFam Aldehyde dehydrogenase3 273 462 - -
Seca9g03657 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Seca9g03657 503 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 27 291 - -
Seca9g03657 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Seca9g03657 503 Pfam Aldehyde dehydrogenase family 31 493 IPR015590 GO:0016491
Seca9g03657 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 15 494 - -
Seca9g03657 503 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03657 Seca-Chr9 57942018 57946675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03657 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 68.263 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03657 K12355 - gmx:100784449 924.08