Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03609 ATGGACCTCGCAGGCCTTGAATGCTTCTTCGAAAGTCAAGTACTCACAGATCGTTTCACCAATTGCGCCCCCCTTTCTTCGGCCGTGAATGCCTTAAGCCACATTGAGCACCAACTCGCATTGCCACCAACCCTAAGGGAGAATTCGACATCGGCGTTCGTGAGGTTCAAGGCTGGGAGCGTGGAATCGGCGCATCACCACACGTTTGGGCACGATTTGGTGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCAAGACTGAACTCTGGCATTGAAGCATTTCCTCCTAAAGATGGTGTGTTGGATGGCAAATACGATGATCTCCCGGAGCAATCATTTTACATGGTTGGTGGTATTGAAGAGGCCATTGCAAAGGCAGAGAAGATTGCTAAGGAATCAGCTACGTCTTAA 411 0.4842 MDLAGLECFFESQVLTDRFTNCAPLSSAVNALSHIEHQLALPPTLRENSTSAFVRFKAGSVESAHHHTFGHDLVFLSMKLEAVNSRLNSGIEAFPPKDGVLDGKYDDLPEQSFYMVGGIEEAIAKAEKIAKESATS. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03609 136 Gene3D - 57 136 IPR024034 -
Seca9g03609 136 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE B 45 84 IPR003500 GO:0005975|GO:0016853
Seca9g03609 136 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 98 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03609 Seca-Chr9 56280697 56281791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03609 67 101 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 57.143 1.29e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03609 - - qsu:112016630 60.4622