Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03608 ATGAATGTAGCTTCAATTCCAATTGTTGAAGGTGTAGAGAAATGGGTCGATAATATTCACAGCAATGTTGTGCAACATGGCCACGAGTGTGTTACTGACTATATACCACACTTGGCAATGGAGTTTGAATCCGAGGTAGTTGCCTATGAATTTTACAATGAGTACAGTAAGAGGGTTGGGTTTGGCATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATATGGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGCAAACGATGTGTTGACAAACGAGACCACTTGACGAAAGAGCCGAGAGCAGAAACCAGAACAGGATGTGAAGCCCGTATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCTTCAATCGACAAAATATGCTTATATGATTCGTTCTCATCAAAAAATTTCTGAGTCACAAGCATCATACATTGTATTGGCAGATGCATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAGCAATCTGGTGGAATAGACAGTATTGGTTACACAAGACAAGACCACAAGAATTACCTTCGAACTAAAAGGAATCAATGTTTAAGGTATGGTGAAGTGGGTGCATTGCTGACGTACTTCAAACAACAAAGTGAAAATCCTTCATTCTTTTGA 690 0.3841 MNVASIPIVEGVEKWVDNIHSNVVQHGHECVTDYIPHLAMEFESEVVAYEFYNEYSKRVGFGIRREYGNKSKKDGIWTSRRFSCFKEGKRCVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFIAQHNHPLQSTKYAYMIRSHQKISESQASYIVLADASGLKPKDFHEYVSKQSGGIDSIGYTRQDHKNYLRTKRNQCLRYGEVGALLTYFKQQSENPSFF. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03608 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 188 - -
Seca9g03608 229 ProSiteProfiles WRKY domain profile. 65 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g03608 229 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03608 Seca-Chr9 56278846 56279535 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g03608 FAR1 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03608 - - psat:127085847 325.865