Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03600 ATGAATAGAGGTGTTCTTCAGAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACTGGTGGAACATCAATATCAACAACATGAGGCCCCCAACTCCACAAGTTCCTTCTTTCTTGTCAACTCCTTCAAACTTTCTTACCCCATATGCCCCCACTTCTTCTTCTCTTCCTTTTCCTTCTTGGCATGACAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTGGTGGCTGAAGAAGATAAAGGTGGAATGAGTGAGTTTCAGAATCAAATGGTGAATCAGGCTCCAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGCTCAGTAAACAGCTATGTGTATGAAGAACTTCACTCAGCAAAGTCTTCTTGGTCTCCTCCAAAATCATGTGTCACAAGTTTCAGCAGCAACATGTTGGATTTCTCTAACAATAACACAGATGTGAGGCATCCACCACCAGATCGATCTTCTGAGTGTAACAGCACTGCATCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAACTCGTTTCCCCATTTGGGAAGACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGCAGTGGATCAGGAAACACGAGGCACCAACATTCACATCCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGTTAAATGAAAACTGCTTGAAGAGGAAAGCAGCTGAGGAGCTGGATTCTCAAGAAGAACCAAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTTTCATGCACTCTGCAAGTTGGGAGTGAGAATGGAGCTGACTATTGGGCACCTGCCCTTGGAGGAGGGGGCTTCCGGTAG 987 0.46 MNRGVLQSSPVQQMMAGNPNWWNININNMRPPTPQVPSFLSTPSNFLTPYAPTSSSLPFPSWHDNQELPESWSQLLMGGLVAEEDKGGMSEFQNQMVNQAPNASLVDVKQESSVNSYVYEELHSAKSSWSPPKSCVTSFSSNMLDFSNNNTDVRHPPPDRSSECNSTASGGALKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSSGSGNTRHQHSHPVQGEKNCIFPEDPGQLLNENCLKRKAAEELDSQEEPKKDLRSRGLCLVPVSCTLQVGSENGADYWAPALGGGGFR. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03600 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 77 309 - -
Seca9g03600 328 CDD bHLH_AtbHLH_like 186 235 IPR045239 -
Seca9g03600 328 Gene3D - 184 238 IPR036638 GO:0046983
Seca9g03600 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Seca9g03600 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Seca9g03600 328 MobiDBLite consensus disorder prediction 146 169 - -
Seca9g03600 328 MobiDBLite consensus disorder prediction 146 186 - -
Seca9g03600 328 FunFam transcription factor bHLH68 isoform X1 185 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03600 Seca-Chr9 55882199 55886268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03600 1 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.382 9.14e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03600 - - gmx:100786555 513.842