Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03565 ATGTATAGACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAATGTGGGACTCTAAGGAAATATAGGACCAATTCTCAGAAAATGAAGGACAAGACAAAGAGCCGGAGGACGGCTGAAAACTTAGACACATCCTTGACAAACAAACAAGACAAAGAAGAGAGGGTCTCAAAAGGATCCACGGAGAGATCTTTTGATCCATCATCCTTGCAGCTTGTAGAGGTATCCAGAGGTGCTCAAAGATTGAACAACATGATTGAATCATGGTCTAGGGGTCGCAAGTATGATGGAAGGTCTGAAGATATTGCAAAAGATTTGTTAAAAGGAGCTCTTGACCTGCAAGAATCTCTAGTAATGCTTCGCAAGGTGCAAGAAGCTTCACAATATATGGCTAGTTTGAAGAGAAAACAAAATGAGAAACCTGAAAGAAGTAGAAGTGATGCAAAGGTGATTGATAGAACAACATTTTCTAATCAATTTGGTGAACAAAGTTATTCAATGGGATTTCAAAGACCTTGGTCTTCAGCTGATGGTTCTTCAAGTAGCTGTAATGAGGAGCTTAAGAAAGTGATTCAGGAGAGTCTGGTTAGACGAAATCTATTGTCAAGCACAACCACTGAAGGAATGGATTCAGCATCAGCATTTCATTCAACTAACTCAAGTCAATCTTCTGGTGTTTGGAATGACAGGCTTTCTGATTCTTCTTTGTCACCATCAATTTCAAGGAAGGAAAGAGGAACCAATCTGGTTGCCAAGCTGATGGGCTTAGAAGAAGTCCCCTCAAGATCATTTCCAGCTGTTATGCAGAAACAATTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACCTATGTTTGAGATAGATACACCAAAGGTAAGGAAGAATAGTTTACTAGTTGAGAAGGTTAATCCTGAAAGACAGAAGACCCTGAGGGAAATTCTTGACACCACTAATTTCAATGGACTTTTGAAGAAGAGTCCTGTAAGAGAGCCCAAGCATCAGGTTTATCATTCCAATGATCACCATTACAAACAGTTTGATGATTTACCTCCCATTGTTCTTATGAAACCTCGATATACTCCATATCAAGGATTTGTAAAAACTTATGAGCCAGTTCCTCAAGAAGAGTTATCCCTTAGAAATCTAAAAGCAAAAACAGTCCATTCCAAAACGTTCAAACAAAGAGAAGGTTCAACCACCAACATGGGAAGAGAAATGGATGAACATGTATCCAAAAGGCTTACCAAAGAGGAGAGAACTAAGCGCCTCAAAGATGTTTTGGAACTGGATGTTAAAGAAATCAAGCCTGTTGAAAATGAGAAGGCTCCAAGAGGTAAGGTAAAATTGTATAGTCATGCTAGTCACAAATCACAAGTGAGTGAAACAGTTGATAAAAAGGCTAAAAGTGAAGCAGTTGATAAGAAAGCTAAGGTAAAGACCATTACTATTAGCAGAAAGCAACCTGAAAAGGAGGTCTCAAAACCAAAAGTGGTGATAAAATCTCAAGATCAAGGAGAAATCAGCCCTGCAAGTACAAAGTTGAGGAAGCCACAAAGTGGGTCCAGAAGTGACAAGAATGAAATATCCTTCAGAAAGAGCACTGCTTCAAATTCACATCTCATCTCAAAACCAAAGATTCAAAAAATTAATAGTTCCAAGGAACAGAGAAAGAATCAGATGAAGAAGCAAAAGTCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTTATTCTTCTGCACAGGATGAACCATTGGGACAAGAAGAAGGAAAGAGTATTGATGTTTCCTGTGAAGATGATGATTGCACTGAGATTAGAATAATCACTACAATAACAGATGATCTCACCAAGGAGCATGGAGTAGATACCTATGCAAATAAGATTAGAGAAAATTGTGAGCAGAGCCAGAGTTCTTCAAGTGATGATATTTTGATGCTAAAGAGTGAACATGAAAATGATGCTATCCCTGCTGAGGTAGCTATTGACACCACCAATATCAGTGAAACTGATCTCATGCCTGACAAGGACTATTCTGAGCTGAAATATTTGCTTCTAACCAGTGAATCATTCATTAGCCATGCAGAGGAGCTCCTCAATCTTGATGTTGATTGTCCTAAGATCCTACCAAAAAATGAAACAAATGGAATAGCCAATGCCAGACTCTATTTGGATTGTGCACATGAACTCACTGAGCATAAAAGCCTTCAGCAGTCACAAGTACTTCACCCCTTATTGCTAACTTGTGCAGGGAATTCAAGATTTCACATCTCTTTAGGCAGGTTGGTTGAGGAAGTCTATAATGCCATTGAGAATCTGACATCTTACAGTGAAAATTCTGGGAAGAAACTTCCTTTGGATAGTATCTTTGCAATGTTGGAGAGAGATATGAAGTGCAACAATGGATTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCTGATGAAGCTGAGCAAGTTGTCAATGAAGTAGAAAACTTAGTTTTAGGTGGATTAATTGATGAGGTAATTATAAATTAA 2529 0.3875 MYRPFVTCDDPKGVVECGTLRKYRTNSQKMKDKTKSRRTAENLDTSLTNKQDKEERVSKGSTERSFDPSSLQLVEVSRGAQRLNNMIESWSRGRKYDGRSEDIAKDLLKGALDLQESLVMLRKVQEASQYMASLKRKQNEKPERSRSDAKVIDRTTFSNQFGEQSYSMGFQRPWSSADGSSSSCNEELKKVIQESLVRRNLLSSTTTEGMDSASAFHSTNSSQSSGVWNDRLSDSSLSPSISRKERGTNLVAKLMGLEEVPSRSFPAVMQKQLESPKILNQKRPMFEIDTPKVRKNSLLVEKVNPERQKTLREILDTTNFNGLLKKSPVREPKHQVYHSNDHHYKQFDDLPPIVLMKPRYTPYQGFVKTYEPVPQEELSLRNLKAKTVHSKTFKQREGSTTNMGREMDEHVSKRLTKEERTKRLKDVLELDVKEIKPVENEKAPRGKVKLYSHASHKSQVSETVDKKAKSEAVDKKAKVKTITISRKQPEKEVSKPKVVIKSQDQGEISPASTKLRKPQSGSRSDKNEISFRKSTASNSHLISKPKIQKINSSKEQRKNQMKKQKSVAEPEAAKPVYSSAQDEPLGQEEGKSIDVSCEDDDCTEIRIITTITDDLTKEHGVDTYANKIRENCEQSQSSSSDDILMLKSEHENDAIPAEVAIDTTNISETDLMPDKDYSELKYLLLTSESFISHAEELLNLDVDCPKILPKNETNGIANARLYLDCAHELTEHKSLQQSQVLHPLLLTCAGNSRFHISLGRLVEEVYNAIENLTSYSENSGKKLPLDSIFAMLERDMKCNNGLINGIWNWGWRHGFSADEAEQVVNEVENLVLGGLIDEVIIN. 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03565 842 MobiDBLite consensus disorder prediction 25 40 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 442 594 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 47 62 - -
Seca9g03565 842 PANTHER OS01G0228800 PROTEIN-RELATED 1 840 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 550 569 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 531 549 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 25 70 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 459 498 - -
Seca9g03565 842 MobiDBLite consensus disorder prediction 207 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03565 Seca-Chr9 54401975 54406245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03565 1 207 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 40.000 1.16e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03565 - - gmx:100797863 1157.9