Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03528 ATGGACTTGACCCCTGATACAACTACCTTATTAGCTGAAGATAATGAAGGGAATGTCATCAGTGAACAACAAATTGATAGCCGGTTGATACAAAAGAATGATGTGATCAAAATTGTTCCAGGTGCAAAAGTAGCATCCGATGGTTTTGTTATCTGGGGACAAAGTCACATAAATGAAAGCATGATAACTGGTGATGCAAGGCCTGTGGCGAAGAAGAAGGGTGATATGGTGATTGGAGGCACTGTGAATGAGAATGGGATTTTGCATGTTAAGGAAAATAGTGTTGGATTAGAGAGTGCCCTTTCCTAG 309 0.4078 MDLTPDTTTLLAEDNEGNVISEQQIDSRLIQKNDVIKIVPGAKVASDGFVIWGQSHINESMITGDARPVAKKKGDMVIGGTVNENGILHVKENSVGLESALS. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03528 102 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 102 - -
Seca9g03528 102 FunFam Copper-transporting ATPase 1, putative 1 102 - -
Seca9g03528 102 Pfam E1-E2 ATPase 3 100 - -
Seca9g03528 102 SUPERFAMILY Calcium ATPase, transduction domain A 22 101 IPR008250 -
Seca9g03528 102 Gene3D - 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03528 Seca-Chr9 53590969 53591277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03528 1 102 Primary Pumps ATPases AT1G63440 76.471 1.63e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03528 K17686 - csin:114300531 173.711