Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03518 ATGACCAGTAATTTTTTTAGTCAGAAACTGACTAGTAATTTTAAAAAGTTAAAAAAAAGGCTAAAATATGAGTTGGCCTCAAAATGGACCAAACCGAGACAACCCACCCGACTTATCCATTTATCCACTCAAGATAATGAAGGGAATGTCACCAGTGAACAACAAAATGATAGCCAGTTGATACAAAAGAATGATGTGATCAAAATTGTTCCAGGTGCAAAAGTAGTATCCGATGGTTTTGTTATTTGGGGACAAAGTCACATAAATGAAAGCATGATAACTGGTGATGCAAGGCCTGTGGCGAAGAAGAAGGGTGATATGGCGATTGGAGGCACTGTGAATGAGAATGGGATTTTGCATGTTAAGGTAACAAGTGTTGGATCAGAGAGTGCCCTTTCCCAGATTGTTCGACGTGTTGAGTCCGCCCAAAGGGCTAAAGCTCCTGTCCAGAAACTTGCAGACCAAATTTCTAAATATTTTGTTCCACTAGTAAGCCTAACACTAACTACTTTTTCTGATTTTCTTTTTAGCTGTTTATAA 540 0.3852 MTSNFFSQKLTSNFKKLKKRLKYELASKWTKPRQPTRLIHLSTQDNEGNVTSEQQNDSQLIQKNDVIKIVPGAKVVSDGFVIWGQSHINESMITGDARPVAKKKGDMAIGGTVNENGILHVKVTSVGSESALSQIVRRVESAQRAKAPVQKLADQISKYFVPLVSLTLTTFSDFLFSCL. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03518 179 Gene3D - 27 143 - -
Seca9g03518 179 SUPERFAMILY Calcium ATPase, transduction domain A 54 139 IPR008250 -
Seca9g03518 179 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 41 170 - -
Seca9g03518 179 FunFam Copper-transporting ATPase 1, putative 29 143 - -
Seca9g03518 179 Pfam E1-E2 ATPase 52 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03518 Seca-Chr9 53524810 53525349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03518 41 175 Primary Pumps ATPases AT1G63440 75.556 1.35e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03518 K17686 - gmx:100817431 208.764