Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03516 ATGACAACCTTGGACATGGGACTTTTGTTGCTGGTGTTATTGCTGGTGTGGATGCGGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGCTTACTGCAGGTGTCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTGGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCTATTGGAAATGATGGACCACTTTATGGAACCTTGAACAATCCAGCAGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCATCCTTTTCCTCACGTGGCATGAGTACATGGGAACTTCCTCATGGTTATGGCCGTGTGAAGCCAGACATAGTTGCATATGGACGGGACATAATGGGATCGAAGATTAGTGCGGGTTGTAAAAGTTTATCAGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTTAGTGTCATTCCTGATCCCGATCGGAAAAAAATCTTAAACCCGGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAGTTATCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGAATCATATCAGATTCTTAAGAGCTACAAACCTAGGGCAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTATACATGGCCCTTTTGTCGCCAACCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCTCCATTTTGAATGGAATGGGTGTTATTGGCTATGTTGAAAGTCCACCAACATGGCATCCTGCTGAAGAAGAAGGGAATCTTCTAAGCATTCATTTTACATATTCTGATATCATCTGGCCTTGGACTGGTTATTTGGCCCTTCATATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGGAATATTGAAGGTAATGTGACTCTCAGGGTTTCCAGCCCTCCAGCTCAAGGAGAGAAGGACCCTCGAATTAGCACCTGTGTGCTTCAATTGAAGTTAAAAGTGGTGCCAACACCGCCACGATCGAAACGAGTTTTGTGGGATCAGTTTCACAATATCAAATACCCACCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCATGGAGATCATCTACATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTACATTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAGCTAAGAGACGATGTTGTAAATACTGGATTGGGATTAGCTGTCTTTGCTGAGTGGTACAATGTAGATACCATGGTAAAAATGAGATTCTTTGATGACAATACCCGGAGCTGGTGGACCCCAGTCACTGGAGGCGCTAATGTTCCTGCACTTAATGATCTTTTAGCTCCATTCGGAATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGAACAGATATAGTGAGGTTTCCAAGGGGTGGTTTTGTACATAGCTTTCCCTTCTTGGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGCTCGGCACAACCAAGGCAGATTCTCCAATTCTCGGTCTTACAGTGATGGGAGAAGGTCGCATAGCTGTATATGGGGACTCAAACTGTTTGGACAGCAGCCATATGGTTACTAACTGTTTTGTGCTTCTGAAGAAAATACTAGATTTTACTAGTGAGGATGTTAGAGATCCAGTGCTTTTCTCTTATTCAAATAAACAAAATACTCCCTTGTATGAAGATGACAATCAGTTGCCATCCCGCAGAACTGATGTAAATTTCTCGGCATATTCAGCTGTTACGGGGAAGGAATTGATCTGCAGGACTGACACAAGGTTTGAAATCTGGGAAACTAAAGGCTACAGTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCGGGTTATCCTGTCATTGACTTGGGGAACGGTTTCAATTCAACTGTTGATGCTTCTAACTTAAGGCGTCCAAAGTTAACTGTGAGAACTAAGGATGACTCTCTGGGGAACAGGTATCTGGGCCTGTTCTATGGAGATGAGCCTGATGCACATATGCTGGTTGGTAGTCACTGGCTCTATCCTGCAGTTGTTGCAGCAACTGGTATTTTGCTATTGAGTTTTTGGCGCATTCGCCAAAAGAGACGTAGAAGAAGGAAAGGATCAAGTTCTGGTAGATTGGCAAATTTATAG 2406 0.4285 MTTLDMGLLLLVLLLVWMRSALVLHQIQRFMHFVCSLMHSLLQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPDPDRKKILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYQILKSYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPTWHPAEEEGNLLSIHFTYSDIIWPWTGYLALHMQIKEEGAQFSGNIEGNVTLRVSSPPAQGEKDPRISTCVLQLKLKVVPTPPRSKRVLWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDARQYGTLLLVDLEDEYFPEEIEKLRDDVVNTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANVPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTDIVRFPRGGFVHSFPFLDSSESGATQNVLGTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFVLLKKILDFTSEDVRDPVLFSYSNKQNTPLYEDDNQLPSRRTDVNFSAYSAVTGKELICRTDTRFEIWETKGYSLQVRGRNRRLPGYPVIDLGNGFNSTVDASNLRRPKLTVRTKDDSLGNRYLGLFYGDEPDAHMLVGSHWLYPAVVAATGILLLSFWRIRQKRRRRRKGSSSGRLANL. 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03516 801 Pfam Subtilase family 46 219 IPR000209 GO:0006508|GO:0008236
Seca9g03516 801 Gene3D Peptidase S8/S53 domain 35 247 IPR036852 GO:0004252|GO:0006508
Seca9g03516 801 PANTHER PEPTIDASE S8 308 566 - -
Seca9g03516 801 SUPERFAMILY Subtilisin-like 44 232 IPR036852 GO:0004252|GO:0006508
Seca9g03516 801 ProSitePatterns Serine proteases, subtilase family, serine active site. 173 183 IPR023828 -
Seca9g03516 801 ProSiteProfiles Serine proteases, subtilase domain profile. 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03516 Seca-Chr9 53466753 53472736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03516 1 799 Subtilisin-like Serine Gene Family AT5G19660 78.837 0.0 1270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03516 K08653 - gmx:100797547 1441.4