Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03495 ATGTCTGATGTTCATAATGAATATATACCGAATCATTCTGTTCAGGGACAAAGTTTTGATGACTTTGAGCCGATTCTCTCCGGCAATAAACTTGCGCAAAGGTCTAGGGGCTTGCCTGAGAGCCATGTCCTTAGAAGTTTCTCAACAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTAGTGGTTCGGAAGAGACCGCTAAACAAGAAGGAAATAGCAAAGAAAGAGGAAGATATCATTACCATAGATTCAAATTCTCTCACAGTTCATGAAAGAAAACTCAAGGTTGACTTAACAGAATATGTTGAGAAACATGAGTTTGTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCCATAGTCCCACTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGTAAGTATTCTATTTACCTTGATTTTCACCTCCCTCTGGATTTTTTTGTTGATACAAAATTACTCTATTTTTTAGGCAGTGGGAAGACTTATACTATGCAACCATTGCCTCTCAGAGCATCCCAACATATTTTAAGATTAATGCAACATACATACTGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTTGAAATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAGAAACTTTGCATGAGGGAGGACGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCTAAAGTTGAGACAATAAAAGAATTTATTGAGAAAGGAAATGCTACGAGAAGTACCGGTACAACCGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGTATCAAGAGGTCAGCTGATGGGACTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTATCTTTTATTGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATCAATAAAAGCTTACTTGCACTTAAAGAATGCATTAGAGCTTTAGACAATGATCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTAACTCACGCACTGTAATGATATCATGCATTTCGCCAAGCTCTGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAGGGGAACAGCTCCAGAAGGGATCCCCTTTCTTCTTCAAACCTTAGAGACTCAATTGTATTGCCTGGGTCTTCAGTTATATCTCAAGATGATACCTTTGAGGATGAAATAACATATGTTTCCAGCGAGAGGAATCAATTTGGTTGGTCCAAACAGCTTGAAAGAGAACCCTCTCCTCCAATTAATGTGGACCGTGTTCCAAGTGGCAGGATGGGGGGAAATTTGGCACCATCTTTGTATTCTGACCCACAAAAGGGTCAAAGAGGTAGTCAAAATGACAGGGCTGACAGTGAAAATCATTACCTAGGGCCAACATATGAACAAGACAGAACAAGACAATCGAGTAAGAGGGTGGATATCAACCAATCATCTGCTGTGGAGAACAAGAGGAAGATAGAATCTCGTGTTAAACATATAGATCTATCACATGTTGAGACTAATCATTCTGATCCTGATGTTGATTTAAATGCCCTGCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAAGTGGAGGAAACAATAGACATTGTTAGGGAGGAGATGAATTTACTCGTTGAAGCTGACCAACCAGGAAATCAACTGGATGATTATATTTCCAAATTGAATGCCATTTTGTCACAAAAGGCTGCAGGAATCTTTCAATTGCAGACGCAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAATGTTTTCGTTTCTTCAGGTAACTGA 1947 0.398 MSDVHNEYIPNHSVQGQSFDDFEPILSGNKLAQRSRGLPESHVLRSFSTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGKYSIYLDFHLPLDFFVDTKLLYFLGSGKTYTMQPLPLRASQHILRLMQHTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRDSIVLPGSSVISQDDTFEDEITYVSSERNQFGWSKQLEREPSPPINVDRVPSGRMGGNLAPSLYSDPQKGQRGSQNDRADSENHYLGPTYEQDRTRQSSKRVDINQSSAVENKRKIESRVKHIDLSHVETNHSDPDVDLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYISKLNAILSQKAAGIFQLQTQLAQFQRRLNEYNVFVSSGN. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03495 648 ProSitePatterns Kinesin motor domain signature. 306 317 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca9g03495 648 SMART kinesin_4 57 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 MobiDBLite consensus disorder prediction 458 534 - -
Seca9g03495 648 Coils Coil 578 598 - -
Seca9g03495 648 CDD KISc_KIF2_like 59 405 - -
Seca9g03495 648 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 PRINTS Kinesin heavy chain signature 307 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 PRINTS Kinesin heavy chain signature 357 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 PRINTS Kinesin heavy chain signature 273 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 ProSiteProfiles Kinesin motor domain profile. 59 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 406 IPR027417 -
Seca9g03495 648 Gene3D Kinesin motor domain 40 410 IPR036961 -
Seca9g03495 648 PANTHER KINESIN-RELATED PROTEIN 6 176 642 IPR027640 GO:0003777|GO:0007018
Seca9g03495 648 FunFam Kinesin-like protein 173 410 - -
Seca9g03495 648 Pfam Kinesin motor domain 176 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g03495 648 Pfam Kinesin motor domain 65 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03495 Seca-Chr9 51881231 51888718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03495 26 407 Calmodulin-binding Proteins AT5G65930 32.576 7.60e-41 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03495 K10393 - gmx:100783382 1069.3