Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03483 ATGGAGCGCATCATCGGGGGCAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGTGATATCTATCTTGCGACACATAATGATACATTCGAGAACGTTGCCGTCAAGATTGAGAACGGTAAAACGAAGCATCCACAATTGCTTTACGAGGCTAGGCTCTACAATATTCTCCAAGGAGGAAGTGGCATCCCGGGCATAAGGTGGCGTGGTGTATACAGGGAGGATAATGTTCTGGTTATGGATTTGCTGGGGCCTAGCCTTGAGGATCTTTTTGTCTACTGTGGAAGAAAGTTCTCCCTTAAAACTGTTTTGATGCTGGCTGATCAAATGATGACCAGAATAGAATATGTGCATTCTAAAGGATTCCTTCATAGGGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCAGGTTTACATAATTGATTTTGGACTTGCAAAACGATATCGGGAATCTGGAACTAATCGCCATATTCCTTACAGGGAGAACAAAAACTTAACAGGAACTGCACGCTATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTCGACGGGATGATTTGGAGTCACTAGGTTATGTGCTTCTGTATTTCCTTAGAGGAAGCCTTCCTTGGCAAAATCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAAGTTTCAACTCCTATTGAGGTATTATGCAAATCTCATCCTCCAGAGTTTGCGTCATACTTCCATTACTGCCACTCTCTGACCTTTGACCAACGACCTGATTATGGATTCTTGAAACGCCTATTTCGGGAGCTGTTTGCTCGGGAAGGTTATGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAATAGTGGAGTCCAACCTCAGATATCTCCGGTTCCTGGAGCAAGCAACAGTCATGCAATGCCCATGGATGTTGACAACCATCGAGTTATTAGTGCTTATTCAGGGGATGTCTCAGCAGAGCGCATTAAATCAGGCAATGCTACTGGTTCTGGTGTTAAAGTTCAGTTTAAATCACCCGTGGGTAAAAAATTGGATTCTCCTCTTGACAAGAATATTTTTGGTGAAGCAAATATCCCCTCTACTTCATACTCTCTTGCCGGTACCTCAAAAAGGAACTCCTTGATGAAGCCTGCGTCCAATGAAGCTGCAAACCCTGGACACGGGCAAGGAAGTAGTAAAATTGGCCCCTCAAGTAGCTGGATTTCATCTCTGCAGCGCATATCTTCGGCCAAATGA 1293 0.4354 MERIIGGKYKLGRKIGSGSFGDIYLATHNDTFENVAVKIENGKTKHPQLLYEARLYNILQGGSGIPGIRWRGVYREDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRESGTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPPEFASYFHYCHSLTFDQRPDYGFLKRLFRELFAREGYEFDYVFDWTILKYQQAQNSGVQPQISPVPGASNSHAMPMDVDNHRVISAYSGDVSAERIKSGNATGSGVKVQFKSPVGKKLDSPLDKNIFGEANIPSTSYSLAGTSKRNSLMKPASNEAANPGHGQGSSKIGPSSSWISSLQRISSAK. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03483 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Seca9g03483 430 PANTHER CASEIN KINASE-RELATED 8 375 - -
Seca9g03483 430 FunFam Casein kinase I isoform delta-like 1 340 - -
Seca9g03483 430 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03483 430 Gene3D Transferase(Phosphotransferase) domain 1 1 324 - -
Seca9g03483 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Seca9g03483 430 MobiDBLite consensus disorder prediction 394 430 - -
Seca9g03483 430 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03483 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03483 430 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03483 Seca-Chr9 51366861 51372731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03483 9 230 EF-hand Containing Proteins AT3G20410 30.172 2.53e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Seca9g03483 Pkinase 2.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03483 K08960 - gmx:100798768 763.066