Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03454 ATGACATCTTATTTTCAACCTTTGCTGCTCTGGACTGGGGTAATGCTCATATGCAGGGATTTAGATCTACTAGTCCTACAATCAAAAACCAGTCAGAATATGAAGCAACGATTGTTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACATTTGCTTACTGTTCTTCAAGCTTAACTCGACAAGCACAAAAATTCTGTATGGAGACAAATGACTCCAGTGATGAAAGAAATGATGATTTTCCTCATCTTGAGTTGGATATTTTGGTGAGAGAGTTCCACATTGTTTATTCTCCTGCTGGCATTGCTGCTGAAGTGTAA 318 0.3836 MTSYFQPLLLWTGVMLICRDLDLLVLQSKTSQNMKQRLLSFVRSLSTVLTFAYCSSSLTRQAQKFCMETNDSSDERNDDFPHLELDILVREFHIVYSPAGIAAEV. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03454 105 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 80 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03454 Seca-Chr9 50172030 50173134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03454 1 80 Mechanosensitive Ion Channel Family AT5G10490 61.250 7.27e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03454 K22047 - gmx:100797302 136.732