Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03413 ATGGAGGCGAATAGGAGGCCATTGGCCAATTACACGGAGACAGTTCAGAGCGAAGTTTCAAAAGAGATGCGGAAAATTCTGGTGGATTGGATGGTTGAGGTTGCAGAGGATTACAAGCTTGTTTCTGATACCATTTATCTTGCTGTTTCTTGCATTGATCGCTTCCTATCTACCCGTCCTATTAGCAGGGACCACCTCCAGCTTCTTGGTGTTTCTTGCATGTTTATTGCCTCGAAATATATAGAGATCACTCCTCCACCTGCCGAAGACTTCTGCTACATGACAGATAACGCTTACACCCTCTCAGAGGTTATACAAATGGAGAGGGAGGTCCTCACATCCTTGAACTCTGGCTTGGGCTATCCCACCGCTAAAACTTTTCTCAGAATTTTTATCAAAGATGCAAAGCAAGACTTCCAGCAATTATTGTTCTTGGCTTTTTATCTTCTGGAGCTAAGCCTATTAGACTATAAGTGCATCAAGTTCTTACCATCAGTGGCTGCAGCATCGGCTTTATTTCTATCCAGATTTATAATCGAACCAGACAAGCATCCATGGAACCTAGAGTTACAATGTCAAACGGGTTATAAGCCATGCGACCTCAAGGAATGTGTCCTTGCCATACATGCGGAGCACTCGAATATCACTGACAGCCCTTTACAAAGTGTACGAGAAAAATACTTGCACCACAAGTTTAATTGTGTAGCATCTTTGACGGCTGGGGAAATTCCTGCAAGTTATTTGGAGCCCATTGATGGATAA 762 0.4344 MEANRRPLANYTETVQSEVSKEMRKILVDWMVEVAEDYKLVSDTIYLAVSCIDRFLSTRPISRDHLQLLGVSCMFIASKYIEITPPPAEDFCYMTDNAYTLSEVIQMEREVLTSLNSGLGYPTAKTFLRIFIKDAKQDFQQLLFLAFYLLELSLLDYKCIKFLPSVAAASALFLSRFIIEPDKHPWNLELQCQTGYKPCDLKECVLAIHAEHSNITDSPLQSVREKYLHHKFNCVASLTAGEIPASYLEPIDG. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03413 253 Gene3D - 2 237 - -
Seca9g03413 253 PANTHER CYCLINS 5 227 IPR039361 -
Seca9g03413 253 SMART cyclin_7 29 113 IPR013763 -
Seca9g03413 253 SMART cyclin_7 126 210 IPR013763 -
Seca9g03413 253 Gene3D - 7 120 - -
Seca9g03413 253 SUPERFAMILY Cyclin-like 2 116 IPR036915 -
Seca9g03413 253 SUPERFAMILY Cyclin-like 121 239 IPR036915 -
Seca9g03413 253 ProSitePatterns Cyclins signature. 24 55 IPR006671 -
Seca9g03413 253 Pfam Cyclin, C-terminal domain 122 239 IPR004367 -
Seca9g03413 253 SMART Cyclin_C_2 122 246 IPR004367 -
Seca9g03413 253 Pfam Cyclin, N-terminal domain 2 117 IPR006671 -
Seca9g03413 253 PIRSF Cyclin_A_B_D_E 1 248 IPR046965 GO:0016538|GO:0044772
Seca9g03413 253 FunFam G2/mitotic-specific cyclin 7 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03413 Seca-Chr9 47840853 47842963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03413 1 252 Core Cell Cycle Gene Families AT5G43080 53.360 4.94e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03413 K06627 - qsu:112017117 302.367