Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03383 ATGAGGGGAAACGGTAACGATGAGCGATGGACGGCAACCGGAACCGGAGGGATTCGGAAGAAAGGGAGCGGGGTTAGGGCGTGGCTCGTTCTCGACGGCACCGGAGAGACGCAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGGACAGGGCTTCCCGCACGTGACCTGCGAATTCTTGATCCTCTCCTTTCATACCCTTCCACTGTTTTGGGGCGTGAGAGAGCCATCGTCATCAACTTGGAGCACATCAAAGCCATCATCACCGCTCACGAGGTTCTCCTCCTCAATTCCAGGGATCCCTCTGTCACCCCTTTCGTCGATGAACTCCGCGCTAGGATCCTTCGTCACCACCATGCCTCCACTCCTCATCATCTTTTTCTTAACCCTGACACCAAAAACCAAGATCTCCAGATTCCAGATGGCACCAAAATTCTCCCTTTCGAATTTGTAGCACTCGAGGCATGCCTTGAGGCTGCTTGCAGTGTCTTAGAAAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGATAAACTCACTTCCAAGATTAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGTTTAGTTGCCATAACTGGTCGTGTTCAAAAGGTGAGGGATGAATTAGAACACTTGCTGGATGATGATGAAGATATGGCTGAGATGTATCTCACAGACAAGCTAGTTCAGCAGCAGTTGGAAAGTTCTTCTGCCTCCTCCCTAAATGATGAGGATGAGGATGAGGATGAGGATGGGGAAGACATGGATAATCTTCTTCAACAGGATATAGATGACAGGCACTTCAATCCTCCTCATATCTCTTACTTCATTTGA 855 0.5041 MRGNGNDERWTATGTGGIRKKGSGVRAWLVLDGTGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVDELRARILRHHHASTPHHLFLNPDTKNQDLQIPDGTKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLESSSASSLNDEDEDEDEDGEDMDNLLQQDIDDRHFNPPHISYFI. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03383 284 MobiDBLite consensus disorder prediction 247 265 - -
Seca9g03383 284 Coils Coil 155 175 - -
Seca9g03383 284 MobiDBLite consensus disorder prediction 240 277 - -
Seca9g03383 284 CDD Mrs2_Mfm1p-like 28 245 IPR039204 -
Seca9g03383 284 Gene3D Magnesium transport protein CorA, transmembrane region 102 273 - -
Seca9g03383 284 Gene3D - 17 99 - -
Seca9g03383 284 FunFam Magnesium transporter MRS2-1 16 99 - -
Seca9g03383 284 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 267 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03383 Seca-Chr9 47624578 47625621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03383 28 281 MRS2 Gene Family AT3G19640 66.078 9.30e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03383 - - gmx:100819578 344.739