Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03371 ATGCGACGGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTTCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGAAGGGTATAGAAATATTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGACGGATAATAATCCAATGTTTTTTTTCAAGATATTTATGTCCTGA 483 0.3747 MRRYLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLISNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDKKEGYRNIGFSKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKTDNNPMFFFKIFMS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03371 160 PANTHER OS01G0519700 PROTEIN 2 157 - -
Seca9g03371 160 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03371 Seca-Chr9 47472670 47473152 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g03371 FAR1 2.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03371 - - ccaj:109794460 219.164