Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03367 ATGACAAGTGCATTGACATATTATCTATTAGTGGCGTTGTTGTTTGGATTCATCCATCATCTGTGTGAGGGTCAACAACCTGAGGCTCTCCCTCCAGCAGCAGAGACCTGTAACGGAGTTTTCATTTCCTATGACTTCATTGGCAGCAGGAAGGAATTCCCTCGCCTCAAGAACGTCACTGCCCAATCTTGGGCCTTCAAAGCCACCGCAACAGTCCTCAACGCAGGCTCCGAGGTAGTTAAATCATGGAAGTTGTTCATCGGCTTTCAACATAAAGAGATTCTAGTCTCTGCCACCGGAGCTGTTCTCATCGATGGAGGTGACCTCCCTGCTTCTGTTGAAAACGGGACTACCTTGGCTGGAGCTTCTCTCCCAGATTTAGAAACCTCCATCGACACAGCCGGTGATCTTACCCAAATTCAAGCCCTCATTAAACTTATTGGCACCCAGTTTGGAGTTAAGCCTCCTGGAATCCCTATGCCTAAAACAATTAAGTTGCTAAATGATGGATACAAGTGCCCCAAACCAAATTCACGTAGTGAGAGTTCTATGTGGGCGTGTTGTAAAAAAGACCCCAAATTCAAGTCGAAACTTCCCAAGACAAAATTCTTGCCGCGGCAGAAAGGGGATCTTACCATATCCTATGACGTTCTTCAAGTGTATGACAATAACTATCTTGTTCAAGTGACGATGGAGAATCACAACCCTTTAGGACGCCTAGATCGTTGGAACTTGACGTGGGAGTGGATGAGAGGGGAATTCATATACAACATGAAAGGCGCTTTCACGCGTGAGGTAGAGTACTCAGGTTGCATCCATGGTGCCGCAGGAGAGTACTACAGGGATATGGATTTCTCTAAAGTCCTCAACTGTCAAAAACACCCCATAATCAGTGACCTTCCTCCAGAGAAATACAACGACACCGACATTGGAAAAATACCTTTCTGTTGCAGAAACGGCACTCTTTTACCTACACTCATGGATTCAACTCAATCCAAGTCAGTTTTCCAGATGCAGGTGTTTAAAGTTCCACCTGATATGAATAAATCAGCTATTTACCCTCCAGAGAAGTGGAAAATCATGGGAGTTCTCAACCCGGATTACAAATGTGGTGCACCTCTCAGAGTGGAACCTTCTAGATTTCCTGAACCCAGGGGACTTGATGCTTCGGTTATTACTTTTGCAAGTTGGCAAATAGTGTGCAACATCACTAGGCCAACCACAAGGAACACTCGTTGCTGTGTCTCTTTCTCTGCCTATTACAATGAGTCTGTTGTACCATGCAACACGTGTGCTTGTGGTTGTGAAAACACAAAGCATTGTAATCCCAAAGCCAGAGCAATGCTTCTCCCTTCAGAAGCTCTTCTTGTACCTTTTGAAAACAGGACTAAGAAATCAGTTGCTTGGGCCAGATTAAAGCATTTTCGTGTCCCTAGTAAATTACCGTGTGGTGATAATTGTGGAGTTAGCATAAACTGGCATGTGGCTTCGGACTTCAAAGGTGGGTGGAGTGCCAGAATCACTCTGTTCAATTGGGAGCCTGACCCTTTTCAGAATTGGTTCACCGCACTGCAATTCAAGAAGGCTTCTCTTGGTTTTGAGAAAGTGTATTCCTTCAATGGGACATTACTTTCACGGCTCAACCACACTATTTTCATGCAAGGAGTACAAGGATCAAACTATTTGTTAGGTGAAGACAATGGAACAAACCCAAAGGTGCCTGGAAAACAGCAATCGGTTATTTCCTTTACAAAGAAAAACTCACCGGGTATCCAAATAGCAAACGGAGATGGCTTCCCTTCAAAGGTCCTTTTCAATGGAGAAGAGTGTTCCCTTCCAATTCAATTCCCCGTGCGAAGTGGAAACCAACATAATGTAGGTTTAGTATATGAATTGTTAGTCTTAGTTTTAGCTTTTACAATGAATCAAATATTGTATTAG 1941 0.4395 MTSALTYYLLVALLFGFIHHLCEGQQPEALPPAAETCNGVFISYDFIGSRKEFPRLKNVTAQSWAFKATATVLNAGSEVVKSWKLFIGFQHKEILVSATGAVLIDGGDLPASVENGTTLAGASLPDLETSIDTAGDLTQIQALIKLIGTQFGVKPPGIPMPKTIKLLNDGYKCPKPNSRSESSMWACCKKDPKFKSKLPKTKFLPRQKGDLTISYDVLQVYDNNYLVQVTMENHNPLGRLDRWNLTWEWMRGEFIYNMKGAFTREVEYSGCIHGAAGEYYRDMDFSKVLNCQKHPIISDLPPEKYNDTDIGKIPFCCRNGTLLPTLMDSTQSKSVFQMQVFKVPPDMNKSAIYPPEKWKIMGVLNPDYKCGAPLRVEPSRFPEPRGLDASVITFASWQIVCNITRPTTRNTRCCVSFSAYYNESVVPCNTCACGCENTKHCNPKARAMLLPSEALLVPFENRTKKSVAWARLKHFRVPSKLPCGDNCGVSINWHVASDFKGGWSARITLFNWEPDPFQNWFTALQFKKASLGFEKVYSFNGTLLSRLNHTIFMQGVQGSNYLLGEDNGTNPKVPGKQQSVISFTKKNSPGIQIANGDGFPSKVLFNGEECSLPIQFPVRSGNQHNVGLVYELLVLVLAFTMNQILY. 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03367 646 PANTHER COBRA-LIKE PROTEIN 7 20 640 - -
Seca9g03367 646 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03367 Seca-Chr9 47436670 47439110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03367 31 638 COBRA Gene Family AT3G20580 58.279 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03367 - - gmx:100799716 1007.67