Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03355 ATGCTTGCGTTTGTTCTGAAGCAATGCTGCATCCCTTCTCTGAGATGCCACAAACCAAGTTACTGCTGTGTTCCAGGGTGTACGGCAACCGTGCTTCTGGTGTGGGCTGATGGTGATGAAAATTTCTTTGCACAATGTGCAAATGTTGGCGACTCTGCCTGTGTTATCAGTTTTGGCAGTGTTGATGGGGAACAAATCAAGATGACAGAAGATCACAGGATAACCAATCATTCTGAAAGACTCAGAATTCAAGGGACGGGTGAACCATTGAAAGATGGGGAAAAACGTCTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCTCGGTTCAGTTCAGAACCTTACATAAGTCAAGTCGTGCATATTGATCAAGCAAGCAACGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGATGTCATCAGGGTGAAGAAGGCAATTCAGCTAGTGCTCCAGATGAAGGAGAGATGCTATACAGAGAGAGAGAATACAGCAGAAAAGATTGCTAGTATGTTGTTGAGTGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTAAACAGATTCTCTTGTAAAGTTGAATCCTAG 639 0.4225 MLAFVLKQCCIPSLRCHKPSYCCVPGCTATVLLVWADGDENFFAQCANVGDSACVISFGSVDGEQIKMTEDHRITNHSERLRIQGTGEPLKDGEKRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASNAFAVLASDGLWDVIRVKKAIQLVLQMKERCYTERENTAEKIASMLLSEAKTLRTKDNTSVIFLDFDTLNRFSCKVES. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03355 212 ProSiteProfiles PPM-type phosphatase domain profile. 1 200 IPR001932 -
Seca9g03355 212 CDD PP2Cc 26 200 IPR001932 -
Seca9g03355 212 Gene3D - 4 209 IPR036457 -
Seca9g03355 212 PANTHER PROTEIN PHOSPHATASE 2C 25 197 IPR015655 GO:0004722|GO:0006470
Seca9g03355 212 SMART PP2C_4 6 198 IPR001932 -
Seca9g03355 212 Pfam Protein phosphatase 2C 25 193 IPR001932 -
Seca9g03355 212 SUPERFAMILY PP2C-like 20 202 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03355 Seca-Chr9 47237104 47239823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03355 26 202 PP2C-type Phosphatase Gene Family AT5G19280 65.405 7.18e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03355 K01090 - gmx:100170643 323.553