Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03350 ATGGCTCCTTCCACAACCAAAGAGATAGAAAAAGAGCTTCTTCCCCTTATCCGTGTCTACAAAGATGGCACCGTGGAACGTCTCTTAAGCTCTCCAACTGTGCCACCTTCCCCTCAAGACCCTGAAACTGGTGTCTCATCCAAAGACATTGTTATCTCAGACAACCCCTTCCTCTCTGCTCGAATTTTCCTTCCAAAATCCCATCAAAACCAAAAACTTCCCATTTTCGTCTACTTTCATGGTGGCGCTTTTTGCGTTGAATCAGCCTTCTCCTTTTTCTGCCACCGCTACCTCAACCTCTTAGTTTCAGAAGCAAACATCATAGCTGTCTCTGTCGATTACAGACTCCTCCCAGACCACCCTCTTCCTGCAGCCTATGAAGATGGTTGGACTGCTCTCCAATGGGTTGCTTCCCATTCCACCAATAACCCCATTCACACAGAGCCATGGTTACTTGATCATGCTGATTTCAACAAGCTTTATGTAGGGGGTGACACCAACGGTGCTAACCTCGCTCATAACGTGACTATGCGTGCTGGCACTGAAACTTTACCTGGTAATCTTAAAATATTGGGTGCATTACTCTGCTGCCCATTTTTCTGGGGTTCAAAGCCAATTGGGTCTGAACCTGTTGAGGAGCATGAGAATAGCTTAGCCATTAAAGTATGGAACTTTGTATACCCAAATGCATCAGGTGGGATTGATAACCCCATGGTCAACCCCTGTGCCCCTGGAGCACCTAGCTTGGCTACACTTGGCTGCTCTAAGATGCTTATTAGTATCACTGGCAAGGATGAGTTTAGAGACAGAAACATTTTGTACTATGAGACAGTGAAGAAGAGTGGGTGGCAAGGTGAACTTGAACTGTTTGAAGCAGGACATGAGGAACATGGTTTCCAGCTCTTCAAGCCTGAAACTGATAAGGCTAAAGACATGATCAAACGCTTGGCTTCTTTTCTGGTATGA 966 0.4586 MAPSTTKEIEKELLPLIRVYKDGTVERLLSSPTVPPSPQDPETGVSSKDIVISDNPFLSARIFLPKSHQNQKLPIFVYFHGGAFCVESAFSFFCHRYLNLLVSEANIIAVSVDYRLLPDHPLPAAYEDGWTALQWVASHSTNNPIHTEPWLLDHADFNKLYVGGDTNGANLAHNVTMRAGTETLPGNLKILGALLCCPFFWGSKPIGSEPVEEHENSLAIKVWNFVYPNASGGIDNPMVNPCAPGAPSLATLGCSKMLISITGKDEFRDRNILYYETVKKSGWQGELELFEAGHEEHGFQLFKPETDKAKDMIKRLASFLV. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03350 321 Gene3D alpha/beta hydrolase 5 321 IPR029058 -
Seca9g03350 321 PANTHER ARYLACETAMIDE DEACETYLASE 15 306 - -
Seca9g03350 321 FunFam Probable carboxylesterase 12 16 321 - -
Seca9g03350 321 SUPERFAMILY alpha/beta-Hydrolases 9 320 IPR029058 -
Seca9g03350 321 Pfam alpha/beta hydrolase fold 76 300 IPR013094 GO:0016787
Seca9g03350 321 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03350 Seca-Chr9 47202222 47203187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03350 8 320 Carbohydrate Esterase AT3G48700 40.122 1.56e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03350 - K13258 gmx:547489 518.079