Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03344 ATGCTTTGTAGTGTATTTATTCTTCGGCAAATGATTGTATGTGTAAATCTGTCTATTGAAGGTGGTCTCTTTCCCTCGTGTTGTCAAGGTTTCAGATGTAGTTTCCATTCTGCAGAGCAACAAACACAATGGTTTTCCAGTATGTATAGCTCTTGTACTGAACTCTCTAATTGGTTATCATTCCTTGCATTCTCCAAGTTGTATTCTAAAATTTACTGCTCACAGGTGATTGATCACACAAGAAGTGGAGAACCACTTGTTATTGGATTAGTGCTTCGGAGTCATTTATTGGTAATTCTTCAATCAAAGGTTGATTTCCAGCATAGTCCTTTGCCCTCAGATCCAAGAGGTGGGGGCAGGTCAATACGCCATGATTCTGGTGAATTTGCAAAGCCTGTTTCTAGTAAAGGAATATGTCTTGATGATATACATCTAAGTTCAGATGACTTGGAAATGTACATAGACCTTGTCCCATTTTTGAATCCCTCACCATATATTGTACCCGAAGATATGTCTCTGACAAAGGTATATAATCTTTTCCGCCAACTTGGTTTGAGACATTTATTTGTTGTTCCTCGTCCATCACGTGTGCTTGGCTTGATAACCAGAAAAGATTTGTTAATTGAGGACACAGAAAATGTGAATACATTAGAGCTCCATGCAACTAGTGTAAGGTCTCTGATGCTTTACTCATTTTACATCCTATTCAGTTTTTTCAAATTTCAAATTTAA 732 0.3743 MLCSVFILRQMIVCVNLSIEGGLFPSCCQGFRCSFHSAEQQTQWFSSMYSSCTELSNWLSFLAFSKLYSKIYCSQVIDHTRSGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDPRGGGRSIRHDSGEFAKPVSSKGICLDDIHLSSDDLEMYIDLVPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTENVNTLELHATSVRSLMLYSFYILFSFFKFQI. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03344 243 Gene3D - 63 214 IPR046342 -
Seca9g03344 243 SUPERFAMILY CBS-domain pair 75 207 IPR046342 -
Seca9g03344 243 ProSiteProfiles CBS domain profile. 160 217 IPR000644 -
Seca9g03344 243 Pfam CBS domain 160 207 IPR000644 -
Seca9g03344 243 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 76 212 - -
Seca9g03344 243 SMART cbs_1 163 211 IPR000644 -
Seca9g03344 243 FunFam Chloride channel protein 152 234 - -
Seca9g03344 243 CDD CBS_pair_voltage-gated_CLC_euk_bac 76 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03344 Seca-Chr9 47151204 47153640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03344 76 227 Ion Channels AT5G26240 78.947 5.81e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03344 K05016 - gmx:100811908 291.967