Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03311 ATGGAGGGAACTTGTAATATTTGTTCCAAGGAAGAGAGCGTTGATTTGACCCAAATCTCTCTCCGACCCCTTCAGCTTTCTGACCTTGATGATGTCATGGTGTGGAGCACTGATGAAAAAGTGGCTAGGTTTTGCTCTTGGGAACCTAGCACCAGCAAAGACGATAGCATTAACTTCATTGAGAGTATACCTACCAAATTTCTATGGTGCAAAGCAATATGTCTCAATGATCGTGCTATTGGATGTATTTCTCTGTCTTCGTATGCAGCCCATGATAAACTGAGGAACAAATCAGCGGAACTTGGCTATGTTCTGGGATCCAAATACTGGGGGAAAGGGATTGTCACGCATGCTGTGAAACAAGTGGTTAAGGCTGCATTTAGTGAGTTGCCACAGTTGGAGAGGCTTGAAGCTCTCGTTGATGTGGAAAATGTTGGCTCTCAGAGAGTGCTGGACAAGGCTGGTTTCCAGAGGGAAGGAGTTCTCAGAAAGTATGTGTTCATGAAGGGGAAAAGCAAAGATATGGTCATGTTCAGTGTTCTTTCAACTGATCCCCAACCGTGA 564 0.4468 MEGTCNICSKEESVDLTQISLRPLQLSDLDDVMVWSTDEKVARFCSWEPSTSKDDSINFIESIPTKFLWCKAICLNDRAIGCISLSSYAAHDKLRNKSAELGYVLGSKYWGKGIVTHAVKQVVKAAFSELPQLERLEALVDVENVGSQRVLDKAGFQREGVLRKYVFMKGKSKDMVMFSVLSTDPQP. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03311 187 Gene3D - 12 186 - -
Seca9g03311 187 Pfam Acetyltransferase (GNAT) domain 20 157 IPR000182 GO:0016747
Seca9g03311 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 182 IPR000182 GO:0016747
Seca9g03311 187 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 12 184 - -
Seca9g03311 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 181 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03311 Seca-Chr9 46942856 46943419 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca9g03311 Acetyltransf_3 2.7e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03311 - - gmx:100527055 283.108