Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03255 ATGATTCAAAAGACTGATATGAGGCTTGAATCGGGGACTTGTAACGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCTCAGGGGAGGCTAATAATCAGTATTCTGTGAATGAGGGTAATGTATATTCTCTTAGGAGCAGAGCTTGTGAAAGCTTGCAGCATTCTGTCAGTGAAACCAGTAATATGCTCAGTGTTAATTCAAGTCATGATTCTCTATCTGAAAATGCCGAGAGTAGACAGATCTTGTCAAATAAATATCAGGATTCCAAGCTTTTAGAAGGCCATGATGACAATACATCTTGTATTAGTAGAGCCTGTGATTCTAATTTAGTAAATGATAGCCATCAAAGGAACGTGGACAGAATAAATATATCTTGTAGTTCAGCTTCAGTTAGTCATTTAGGGGCGGAAGGATCTGAAAGTGCTCCATCTGTTGACATGTCTGGCTTGGAGATTCCATCTTCTAAAGATGCAGACTCTGGCCATAGCTCACCTAAGGTACAAAGGCTGTATGGACAATCTCGAAGTAGTAAATCTCTCTCAGGAAATCCAAGCATAATACATGAGGAAAAGGATTCCTGTTCTCATATCCCAGAAAAGTTGTCAGAATGCTTTATTGAGAATTCCAGTTCATCATTAACCAAAGAGAGGGCGCCTATTGTTGTTTCTGGTGAGAAATCTATTGCCAATAAGGATATCATTATTAGCAATACTGCCAAGGTTTCACCAAAAATATGTCCAAAGTCAGAAGTAGATACTGATAATGATGTCTGTGCTACTAATGAAGAAGATCATAAATGTTCAGTCCATGATGGACAGCATGAGAAATCTGAAGAGCTGGTTAAATCACCTGGAAACCAGGCACCTCAATCTGAAGATGAGAGTGAGGAGTCAGATGTTGTGGAACACGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGCCGTGACGATCTACTTGCTATATGTTGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTCAGAAAGTCCCTGAAGGGGATTGGTTGTGTGAAGAATGCAAAGATGCAGAGGAGACTGAAAATAAGAGGCTGGATGTTGAAGAAAAAAAATCCAATAAAATTAGTTCAACTTCACAAGTTTCTGGCAAGAGACTTTCTGATAACGTCGAAGTAGCTCCTCCATCAGCAAAAAGGCAAGCTCTTGAATTAAGCACAGCATCACCAAAGGCATTGAGCCCCAAGAGATTAGTTCCACTGTCACGAGAATCTTCATTTAAGAGCTTAGATAAATTGAAAGCGAAGCCTGGTCTTGTGGTGCCTATTCGTAACCACTCTGGTGGTGATGATGCAGAGGTTGCCCGTTCTCCTTCTATTGGACCCCGGGGTCAAATTTCAAAAAGTATATTGTTGAAGTCTAATTCATCCAACAACTTAAATTCCAAACCAAGAGTCAAACTTGTTGATGAAGTCGTTCCCCCAAAACTAAAAGGGGGTAATGAACATACTTCCAAGAATGTGGAGACACCTGCTCGGATGATGAACAAATCAACATTATTCAAATCCTCAAGTTTGGGTCGATCCAGTGCAACCGAATCGAAAGTTAAAATGCTTTCACCCAAGTCTACAACTTCTCAGGAATTGAAAGGATCTAGACATTTAAAAGAATCAGGTGCATTAGACAGGAAATTTCTGTCCAGGATTGATCGGCCTGTGGCTAGTTCTGTTGTTTCCACACCTAAGGGTGATCAGAAACTTACACCTCGTGGTGAAACCACTAAACCTTCAGCAGTTAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAGTCAAGTGCATTATCAAAGTCAATGGGTAATATAAGCCGTAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAGCCAGTATTAATGAGGCGCTACAGGATGTGCTGCCTCGTTCACGAGAAACAGTAAATCAGGTTGAGAAATCCAGAGATAGTTCTGGTGATCGTGTAAAGTCTGTTGTTCCTGCTGCTTCAAAAGGCCCATTCTGTCAAAAATGTAAGCAATTTGGCCATTCTATGGAATGTTGCACAGCTGGTACTACACAAGAATCTGGTGCTGAAATATCTGTTGCTGCCTCAAGTAGTTCAAAAGAGGAAATGCATAAAGGCAATAGATTGAAAGCTGCAATCCAGGCTGCTTTACTTAAAAGGCCTGAAATTTACAAGAAGAAAGAAGTACCTAATCAAACTGATGAAGTTTCTACATCGGGAACAGAATTGAATTGTGAAGTGACTTCACAAGACCCAATGTTGGTTTCTGGCATGCTGAAGAATAGTATATCTGCTGAAGAAACCCATGGACAACAGGAAATCCTTGAGAATTCTACATCTGGTTCTTCCAAATGTTCGTCTGCCAATGATTTGAAGCAATGTAACTCTTGTCCAACTGATTTTTGTTCCCAACCAGAAAAGTCAGAGTCAATTGGTCTTACTGCTGGAAAGCCTTCAGTGAGAGACTTGTCGGATAAAGCTGTGGCAATCTCAAGTGTTCTTCCGAAGATGTTGGCCTTTCCTAAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCAGACTTATGTACAGGAGTTCAGGCACATTTATCCTCTTGTGCTTCTCCAAAGGTTCTTGAGGTAGTGAGCAAGTTGGTGCCCAAAGTTCCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCTCTGCAATTTCATCATGGTGGTGCTAGAGAATATGATATTGCTCTTTACTTCTTTGCCAGAGATGTTGATAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTCAAGGAATTATTGATGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTGTTTAGGGGGAGGAGGATCAGTCATTCATATTCTGCAAAAAAGATTTGTATTCCCAGTTTGAATGCAATACCAATTGAGGAGAATTCTTCAACTGCTGCTGTGACTTTGTCTGAAACGCACTGTTTGCCAAAGTGCATGGATGAAGAATCAATTAATTGTGATAAAGCATGCAATGCACTTCTCCCATCCACTTCCATAGACCAATGCCAGGTTACACTTAGTAGGAATATTGATATCAATCACCAGACGCATTTCAGTTCACAAGTAAGCTTAGAGAAGCTAGACAGTAGAATTGACGCCAAATCTACATCAAGGGTTCCAAGAAGCAATACTCTTTTATGTCAAGAAATGAAATCCACTTGTCCGCTGAAAGCTGGTGTACTAGAACATGGGCAGTGCAGAGAGTCTAAACCTCCTGAAGCAATGGGAGCAAGTGTAAGCAGTAGGATTATGGAAGCAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAACACCCTGTCTCCGGCAATTCCTTCTTTTGGCAATCAAGAAAGAGGTGCTGCAAGTAACATTAATAAGGATGAAATTTCAGAGAGAGTTAACATTGATGAAGATCAGCTAAAGCTTAAGAGGAAACAGAAAGAAGGTTGTCACTATATTGATTTGGAAGAAACTATTGACAATCAAGAAACAGGTGCTGCAGGCAATACTGGTAAGGATGAAATTTTAGAAAGAATGAACAGTGATACAAATCAGCAAAGGCCTAAGAGGGAACTAAAAAATAGTCACTATATTGACTTGGAGGCAACTGTTGAAAATCAAGAAACAGGTGCTGCAAACGATACTAGTAAGGATAAAATTTCAGAGAAAATGGACAGTGATGAAGATCAGCGACGGCTTAAGAGGAAACTGAAAGATGATGATCACTATATTGACTTGGAGGCAACTTTTCAGGAAGACCTGTCTGTAGAAGGAAGCAAGTGCCAACTACCAGATGATAAAGAAGTTCATCCTGTGGATCTTTCTGCTGCTGTTATGCAGGCTTCACCAGTTAGTTGTCAGAAAAAGCATTGGAATGAGGTAAATGGCAAATTAGAAGATGGAGAAAATTCTAGCAAGAAGCTGAAGACAGATTTTGGTGGGATTTATGGATGTTACAGTTCTGGTGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTGGGAAATGATATTGGTTCCTGTTCTTCAGTTGAGGACAAAAGATGTGAAGAAGCCTGTAATGAGAAAATCATCTGTGAGGACTTGGGAACGATGGAAAGAACCTTCTTTCCTGTTGAGTCACAGTTGGGGTTGAATAGGATGTCATTTAAAGGGCTTCATGAGTACCAAGACCAATTTCAAGATGGGATTCCGAGTCTAGAGCTTGCTTTAGGGGGTGAAACAAAACCACCACTTCTGCCATCGCCTGCCCCCAAGGGTATGCTGCCTTTCCTAGTTGGGGAAGTAGACAGGAAAAATAACCGTCCAGATAGCTTGGCAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTTTCCCTATCGTTTCCATCTTCAAACAAGGAACACACAAAACCTGCTTCAAAAGCAGAGCATTTGCCTGATGGGCACCGTGTGAATACCCCGTTTCTCCTTTTTGGGAGATTCACAGACAAATAA 4701 0.411 MIQKTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRSGEANNQYSVNEGNVYSLRSRACESLQHSVSETSNMLSVNSSHDSLSENAESRQILSNKYQDSKLLEGHDDNTSCISRACDSNLVNDSHQRNVDRINISCSSASVSHLGAEGSESAPSVDMSGLEIPSSKDADSGHSSPKVQRLYGQSRSSKSLSGNPSIIHEEKDSCSHIPEKLSECFIENSSSSLTKERAPIVVSGEKSIANKDIIISNTAKVSPKICPKSEVDTDNDVCATNEEDHKCSVHDGQHEKSEELVKSPGNQAPQSEDESEESDVVEHDVKVCDICGDAGRDDLLAICCRCSDGAEHTYCMREMLQKVPEGDWLCEECKDAEETENKRLDVEEKKSNKISSTSQVSGKRLSDNVEVAPPSAKRQALELSTASPKALSPKRLVPLSRESSFKSLDKLKAKPGLVVPIRNHSGGDDAEVARSPSIGPRGQISKSILLKSNSSNNLNSKPRVKLVDEVVPPKLKGGNEHTSKNVETPARMMNKSTLFKSSSLGRSSATESKVKMLSPKSTTSQELKGSRHLKESGALDRKFLSRIDRPVASSVVSTPKGDQKLTPRGETTKPSAVNNNRELKVNQDGKSSALSKSMGNISRKSLEPQVSSERTSASINEALQDVLPRSRETVNQVEKSRDSSGDRVKSVVPAASKGPFCQKCKQFGHSMECCTAGTTQESGAEISVAASSSSKEEMHKGNRLKAAIQAALLKRPEIYKKKEVPNQTDEVSTSGTELNCEVTSQDPMLVSGMLKNSISAEETHGQQEILENSTSGSSKCSSANDLKQCNSCPTDFCSQPEKSESIGLTAGKPSVRDLSDKAVAISSVLPKMLAFPKYEYIWQGVFEVHRNGKPPDLCTGVQAHLSSCASPKVLEVVSKLVPKVPLNEVSRLSTWPLQFHHGGAREYDIALYFFARDVDSYERHYKGLLDHMIRNDLALQGIIDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRRISHSYSAKKICIPSLNAIPIEENSSTAAVTLSETHCLPKCMDEESINCDKACNALLPSTSIDQCQVTLSRNIDINHQTHFSSQVSLEKLDSRIDAKSTSRVPRSNTLLCQEMKSTCPLKAGVLEHGQCRESKPPEAMGASVSSRIMEAKTDSDISVKQENTLSPAIPSFGNQERGAASNINKDEISERVNIDEDQLKLKRKQKEGCHYIDLEETIDNQETGAAGNTGKDEILERMNSDTNQQRPKRELKNSHYIDLEATVENQETGAANDTSKDKISEKMDSDEDQRRLKRKLKDDDHYIDLEATFQEDLSVEGSKCQLPDDKEVHPVDLSAAVMQASPVSCQKKHWNEVNGKLEDGENSSKKLKTDFGGIYGCYSSGGRDSFNDSFTSLGNDIGSCSSVEDKRCEEACNEKIICEDLGTMERTFFPVESQLGLNRMSFKGLHEYQDQFQDGIPSLELALGGETKPPLLPSPAPKGMLPFLVGEVDRKNNRPDSLADGQEDDGVAASLSLSLSFPSSNKEHTKPASKAEHLPDGHRVNTPFLLFGRFTDK. 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03255 1566 MobiDBLite consensus disorder prediction 521 565 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 1526 1553 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 669 690 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 287 319 - -
Seca9g03255 1566 PANTHER - 324 1040 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 154 210 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 512 573 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 458 482 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 671 685 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 1287 1304 - -
Seca9g03255 1566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 400 IPR013083 -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 595 656 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 176 207 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 593 656 - -
Seca9g03255 1566 SUPERFAMILY FYVE/PHD zinc finger 314 375 IPR011011 -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 379 435 - -
Seca9g03255 1566 MobiDBLite consensus disorder prediction 1273 1304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03255 Seca-Chr9 46288203 46298168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03255 323 384 C2H2 Transcription Factor Family AT3G01460 35.484 4.67e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03255 - - gmx:100806639 2048.09