LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g03251	ATGGTTAGTATTATAAGTACCAACAATCAATGCAACCCCTCTCACACACACCAAACATGGGGGGCTGGAGAAGGTGCAGTTGGGGTGAGAGGTCTCAAAGAAGAAGATGTTGTTGGAGAGAATGAAGAAGAAAACAAATGGCCACCATGGCTGAGGCCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAAAGCGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCTGCCTGCTTGGCATCTCACAGAGAACACAGAGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCCGAGATACAGAAATTTCTGGACATAACAGGGGTACAAACTTACATAATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACCAATACCTGCCACGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGCTGTAAGATAGTTGGAACCTCCAAGGAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGATGGTGAAGAATCAATAAATGGTGGAAGTGGCAGAAGCAAAATAATCCAGAGCTTTACACCATCAACACCGCCACCAACAGTGGTGAGTTACAGGACTGCTAAGAGAAGGAAGGGAGTCCCACGTAGAGCTCCAATGGGGGGAGGGCTCATTATAGAATACTAA	735	0.4599	MVSIISTNNQCNPSHTHQTWGAGEGAVGVRGLKEEDVVGENEEENKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCHVCERSLLDSFSFCSLGCKIVGTSKEFRKKKMLGETDGEESINGGSGRSKIIQSFTPSTPPPTVVSYRTAKRRKGVPRRAPMGGGLIIEY.	245

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g03251	244	Pfam	PLATZ transcription factor	103	174	IPR006734	-
	Seca9g03251	244	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	42	236	-	-
	Seca9g03251	244	MobiDBLite	consensus disorder prediction	196	217	-	-
	Seca9g03251	244	MobiDBLite	consensus disorder prediction	186	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g03251	Seca-Chr9	46265944	46268884	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Seca9g03251		PLATZ	6.2e-29	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g03251	-		-	gmx:100792668	389.808