Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03196 ATGTTGTCAGTAGCACCTTCTGTTGAAACCAAACAGAGCCCAGAAGTGCCTAAAAATGCTGCTGCTACTACTACTCCTAACAACCAAAACCAACCTAGCGTTTCTCCCCAAACTACCCACATATTCAAATCAAAATTACCAGATATACCAATCTCCAACCACCTCCCTCTCCACACCTACTGTTTCGAGAAACTCTCTGAATTCGCCGATCGTCCATGTCTCATCGTCGGTTCCGCCGGAAAAACCTACACCTACGCCGAGACTCATCTCTTGTCTCGAAGGATCGCCGCCGGTTTCTCCAAACTCGGCATCAAAAAAGGCGACGTCATCATGATTCTCCTCCAAAACTCCGCTGAGTTCGTCTTGTCCTTCTTCGCAGCCTCCATGATCGGCGCCGTCGCCACCACCGCTAATCCGTTCTACACCTCCGCTGAGATCTTCAAGCAACTCACCGCTTCCAAAGCCAAGCTAATCATCACGCAGGCAATGTACGTGGACAAGCTCCGGCAGCAAGAGGACGGTGCTCATCCGAAGCTCGGGGAAGACTTTAAGGTGGTCACCGTCGACGAACCGCCGGAGAATTGCTTACATTTCTCGGTGATTTCAGAGGGAAAAGAGGAGGAAGTGCCGGAGGTGGAGATAAACCCTAACGACGCGGTGGCGCTGCCGTTCTCTTCAGGAACGACAGGGTTACCGAAAGGAGTGATTCTGACGCACAAGAGCTTAACAACGAGCGTGGCTCAACAGGTGGATGGGGAGAATCCGAATCTGTATTTGAGTAGCGAAGATGTTCTGCTCTGCGTGCTTCCCCTGTTTCATATATTCTCGCTCAACAGTGTGCTATTGTGCGCTCTGAGAGCAGGGAGCGCTGTTCTATTGATGCATAAGTTCGAGATAGGGACATTGCTGGAGCTGATACAGAAGCACAAGGTGACGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCACTGGCTAAGAATCCGACGGTGGCGGAGTTTGACCTCAGCACTATACGGTTGGTGCTGTCAGGGGCTGCGCCGCTTGGGAAGGAGTTGGAGGAGGCTCTCCGGAGTAGGGTGCCCCAGGCTGTTTTGGGACAGGGGTACGGGATGACGGAGGCAGGGCCGGTGCTGTCCATGTGTTTGGGGTTTGCAAAGCAGCCGTTCCCAACAAAGTCAGGATCATGTGGCACTGTTGTAAGAAATGCTGAGCTTAAGGTTGTTGACCCTGAAACTGGTCTTTCTCTTGGCTACAATCAACCTGGTGAAATCTGCATCCGAGGGCAACAGATCATGAAAGGATATTTGAACGATGAGAAGGCCACAGCAACAACCATCGATGCGGAGGGTTGGCTTCATACCGGTGATGTTGGCTACATAGATGATGATGATGAGATTTTCATCGTTGACAGGGTCAAGGAACTCATCAAATTCAAAGGCTTCCAAGTAAGTATGCGTTCTTTAATTTATTTATGCGTTCATTTAAATTAA 1491 0.5091 MLSVAPSVETKQSPEVPKNAAATTTPNNQNQPSVSPQTTHIFKSKLPDIPISNHLPLHTYCFEKLSEFADRPCLIVGSAGKTYTYAETHLLSRRIAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTSAEIFKQLTASKAKLIITQAMYVDKLRQQEDGAHPKLGEDFKVVTVDEPPENCLHFSVISEGKEEEVPEVEINPNDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLSSEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLELIQKHKVTVAMVVPPLVLALAKNPTVAEFDLSTIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGLSLGYNQPGEICIRGQQIMKGYLNDEKATATTIDAEGWLHTGDVGYIDDDDEIFIVDRVKELIKFKGFQVSMRSLIYLCVHLN. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03196 496 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 473 - -
Seca9g03196 496 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Seca9g03196 496 MobiDBLite consensus disorder prediction 1 38 - -
Seca9g03196 496 SUPERFAMILY Acetyl-CoA synthetase-like 51 485 - -
Seca9g03196 496 Gene3D - 33 472 IPR042099 -
Seca9g03196 496 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 485 - -
Seca9g03196 496 Pfam AMP-binding enzyme 65 478 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03196 Seca-Chr9 45366200 45370556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03196 35 495 Monolignol Biosynthesis Gene Families AT1G65060 72.495 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03196 K01904 - gmx:547492 782.326