Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03098 ATGAATTCCATGGAGACTACCATCACCGACGGTACCAAATGTAAAGAAATTGAACGACGCTATGATAATTACCGAAAGAAGAGAAAACGACCTTGTAAGGTGGCCGTGATTCCCACAATTGAATCAACCGGAGATGATAATTGCACCGCCACCGCATCGCACGGTTTCATATCCGTCATAGGTCGGCGGAGGGTGATGGAGGACGCCGTTAAGGTCGTTCCAGGTCTTTTGCCGGTGGAACAGCGATCGTGCGGCTATGATTTCTTCGCGGTTTATGACGGACACGGTGGGACGAAGGTGGCGAATGCTTGCCGTGACAGGATGCACTTGTTGTTGGCAGAGGAAGTGAAGAAGGAAGGGTGGAAGGAATTGGATTGGTGTAAGGTGATGTGTTCTTGTTTCATGAAGATGGACCAAGAAATTGGAGTCGGTGGTGAAACGGACGATGACTTGGGCGGGAACACCATGGGTTCTACGGCGGCGGTGGTGGTGGTTGGGAAGGAGGAGATTGTGGTGGCTAATTGTGGAGACTCAAGAGCGGTTTTGTGTCGCGGCGGTGTAGCTGTGCCACTTTCACGTGATCATAAGCCTGATCTTCCAGATGAAAAAGAGAGGATTGAAGCGGCGGGTGGAAGAGTCATTAATTGGAATGGGAATCGTGTTTTAGGAGTACTCGCTACGTCCAGATCCATAGGGGATCACTGCATGAAGCCTTTTGTGATCTCTCAACCAGAGATAAAGGTGCATGCACGAACAGAGGAAGATGAGTTTGTTGTGGTAGCGAGTGACGGTCTGTGGGATGTGGTATCAAACAAGTTTGCTTGTAAGGTGGCAAGAAGTTGCCTCCAAGGGCACATGAAGAGGAATTTAAAAGAGGACTCTATCAAAAGTTATGCAGCAGATGCAGCGGCATTGTTAGCTGAGTTGGCTATGGCTCGGGGAAGCAAAGACAACATCAGTGTCATAGTCATCCAGCTCAAGGATTTTTGCCATTCAACCTCTTAG 1005 0.4905 MNSMETTITDGTKCKEIERRYDNYRKKRKRPCKVAVIPTIESTGDDNCTATASHGFISVIGRRRVMEDAVKVVPGLLPVEQRSCGYDFFAVYDGHGGTKVANACRDRMHLLLAEEVKKEGWKELDWCKVMCSCFMKMDQEIGVGGETDDDLGGNTMGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDLPDEKERIEAAGGRVINWNGNRVLGVLATSRSIGDHCMKPFVISQPEIKVHARTEEDEFVVVASDGLWDVVSNKFACKVARSCLQGHMKRNLKEDSIKSYAADAAALLAELAMARGSKDNISVIVIQLKDFCHSTS. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03098 334 ProSiteProfiles PPM-type phosphatase domain profile. 53 326 IPR001932 -
Seca9g03098 334 SMART PP2C_4 43 324 IPR001932 -
Seca9g03098 334 CDD PP2Cc 53 326 IPR001932 -
Seca9g03098 334 Gene3D - 46 329 IPR036457 -
Seca9g03098 334 FunFam Protein phosphatase 2C 51 46 333 - -
Seca9g03098 334 SUPERFAMILY PP2C-like 51 328 IPR036457 -
Seca9g03098 334 PANTHER PROTEIN PHOSPHATASE 33 326 IPR015655 GO:0004722|GO:0006470
Seca9g03098 334 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Seca9g03098 334 Pfam Protein phosphatase 2C 55 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03098 Seca-Chr9 44535387 44537207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03098 50 327 PP2C-type Phosphatase Gene Family AT2G29380 48.789 1.26e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03098 K14497 - gmx:100813248 481.1