Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03096 ATGCAAGCACACCTTGAACTCCGAGATGGTGCTGATATTGGATCCTCTTTATCAAAGCTCATTTTATCAAGTGGGACAAACACCCTTGACTCAATTTTCTCTGATTACCCCTTAACAAATGGTGGCACTACTTCAACTACAACTAATTCCATGTTGGATTACATGGAACCCTTTGGTTCTTCAGCTTTTGAGCCTTTGGGTTCCTCTGTCTACCTTCGCCAAAGAGACATCCTTCAAAAATTCTACCATGAAACTCGGGGAAATGGGTCTTTTGTTCCCACTTCCTTTGCAAATCCATCTCTAAACCCTGTATACACGAGTTCTCTAACCTCTTTCTTGAACCCTAGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGGCACTGGGGAAAATGGGTCGCTGAAATTAGACTCCCTCAGAATAGGATGAGGGTTTGGTTAGGCACTTACGACACTGCAGAAGCTGCTGCATATGCTTATGATCGTGCAGCTTATAAGCTCCGTGGAGAATATGCACGTTTGAATTTCCCGAATCTGAAGGACCCAAGTAAGTTAGGATTCGGAGATTCAACGAGGTTGAATGCTTTGAAAAGCTCAGTGGATGCAAAAATTCAAGCTATTTGTCAAAAGGTGAAAAGGGAGAAAGCCAAAAAGAGTGCCGCAAAGAAGCTGAATTCAGGGAAGAGTGAGAAATCACAACAGAAGAAGATTAACTCGTCTTCTTGTTCTTCTTCATCATCGTTACCGTTATCACCGCCGTCGATTTTTTATGATAATTGGGCGAACGAGTTGTTTTCACCGACTGTTTCAGAGGATGGAGTTTGGAAAGGAGAGAACTCTTTTGGCTCTGTTTCGACAGAATGTCCAACAATGGTAACAGGGGAAACAGAGTTCGAAGGATGTTCCCTTGCAAGGATGCCATCTTTTGATCCTGAGTTGATTTGGGAAGTTCTGGCTGTTTAG 963 0.4309 MQAHLELRDGADIGSSLSKLILSSGTNTLDSIFSDYPLTNGGTTSTTTNSMLDYMEPFGSSAFEPLGSSVYLRQRDILQKFYHETRGNGSFVPTSFANPSLNPVYTSSLTSFLNPSKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSTRLNALKSSVDAKIQAICQKVKREKAKKSAAKKLNSGKSEKSQQKKINSSSCSSSSSLPLSPPSIFYDNWANELFSPTVSEDGVWKGENSFGSVSTECPTMVTGETEFEGCSLARMPSFDPELIWEVLAV. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03096 320 MobiDBLite consensus disorder prediction 231 249 - -
Seca9g03096 320 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Seca9g03096 320 CDD AP2 119 179 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 26 318 - -
Seca9g03096 320 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Seca9g03096 320 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 MobiDBLite consensus disorder prediction 219 249 - -
Seca9g03096 320 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Seca9g03096 320 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03096 Seca-Chr9 44503664 44504626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03096 11 319 AP2-EREBP Transcription Factor Family AT1G64380 47.143 5.30e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Seca9g03096 AP2 6.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03096 - - gmx:100785364 390.578