Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03083 ATGGAACAGCTCCGGCATATTGGAGAGGTTCTTGGGAGTCTGAAAGCACTCATGGTTTTACGAGATGAAATTCAAATCAATCAACGCCAATGCTGTTTGATCCTTGACACGTTCAGTTTGGCATTTGACACAATTGCAGATGAGATAAAGCAGAACCTGAAGCTGGAGGAGAGGAACACCAAATGGAAACCCTTGGAGTTTCCTCTGAGAGAGCTCTGCAGGGTTTTCAAAGAGGGTGAGCTCTACATCAGGCAATGCTTGGATTCCAAGGAATGGTGGGGGAAAGCAATCACCCTTTCTTTGAATAGAGATTGCGTTGAATTTCACATTCACAACTTGCTCTGTTATTTCCCTGCGGTCATTGAGGCAATTGAGAATGCTGGGGAGGTGTCAGGGCTTGACCAGGATGAGAAGTTGAAGAAGAAACTCATGCTAACGAGGAAGTATGACAATGAATGGAATGACCCCAAACTTTTTCAGTGGAGATTTGGGAAGCAGTATTTGGTTCCTCGCGAGATTTGTGAGCAATTGGAGAATGCTTGGAGGGAGGACAGATGGAGGCTCATAGAAGCACTCAAAGAGAAGAGGTGTTCTGCCAAAGTCACATGTACAAAGAATGAGCAGCACCTTGCTGACTTGCTGTTGAAGAAACTGCTGAATGGATCAGAGAAGACCAACAAGGAGCTGTGGCCAATTGCAGTGCTGTTAGGAGCTAAGGATTATCAGGTGAGAAGAAGACTAGGACGGGGAAAGGAGTTTAAGGAAATCCAATGGCTAGGACAAGGCTTTGCATTGAGGCACTTCCATGGGGAGAGACAAGCACATGAGGCTGAGATTTCCACTCTGCTATCTCTTTCTCACCCCAACATACTGCAATACCTCTCTGGGTTTTATGATGAAGAGAAGAAAGAATTTTCTCTTGTCATAGAGTTGATGAACAAGGACCTGTGGACCTATATGAAGGAGAACTGTGGCCCAAGGAGACAGATTTTGTTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGCATGGAGTACCTCCACTCCAAAAAGATTTACCATGGAGACCTTAACCCTTCTAACATCCTACTCAAAGCCAGGAACTCCCAAGAAGGTTATTTTCAAGCAAAAGTTGCAGGGTTTGGCTTGTCTTCTCTGAAGAATGATGAGAGCCCCATTAATGAGGAGCTCAACCCTTCAATTTGGTATGCTCCTGAAGTTCTGACCGAGCTAGAACAAACAGGAAATGCATCTTCCTCTTCCAAGTACTCAGAGAAAGCAGATGCCTATAGCTTTGGGATGATATGCTTTGAGCTCCTGACTGGGAAAGTGCCCTTTGAGGATAACCACCTTCAAGGAGATAGAACGAACCAAAATATCAAAGCAGGGGAGAGACCACTATTCCCATACCGTTCCCCAAAATACCTTGTCAGCTTGATCAAAAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCAACCTTCTCATCTATCTGTAGGATTTTGCGCTACACCAAGAAGTTTCTTTCCATGAACACAGAGTACCAAATCAATACTGAACTCAATCAGCTTGAACTGCAGTCCCCACCTGTGGATTGCTGCGACATAGAAACAATGTTCCTCAAGAGCTTTCCGATGGAGAGGGCATCTAATCTGTCCGCTTTATCACAAATACCATTTGAAATGTTTGCTTATAAAGTTGCTGAGAAAGGGAAGATCAGTCAGAACAATACTAAAGATAAGTGCTCCGAACCGGCAAAGGATGAGCCTTCAGTGTCAAGGGACGAAAATGATGACCAAAACACAGTTTGTGGAGGAGATGAAATTGCATTCATAATGGAAGATCCACTCCCACCAGTAACCAATCCAAGGCCAATTAGTGGTGACACACAGTCTGTTTGTTCCGAAGCCCCGTCCAAGAAAAGTGTTACAATAAAGAAACCAACACAAGTGAAGGCCAAGACAGACCAAGGACCTCCAAAATTGAGAGTAACAAAATCATTACCGCCATCTTTATCTGGTCGCATTTTAAGGATAAATAAGGTGAATCAACCATCAATGGCATCGAGCCCTCTAAGCCCTCGTAGAAGAAGGCCTTCCAATGTCACTGAATCCGAGCGTAATACCAATATCAACAAAGGGAGCCAATCACCACCAGTGTCAACTCCTTTTAGCTCAGTTAGGAGAAAAAGAAGTGAGGGTCATGTCTCGGATTCTAAGTCCAGTTTAAAGCTGAAAACAAGGGATCAATCACCATTAACAAGATCTAGTCATCTCACAGATTCTATCGGTAATTTTAAGACGAAAAAGTCACAACTAACGTCGAACCTTTCTTCGAGCCCGGCAAGATTGAGACGTGTCAATAGTACTGACACCAATTTGAAGATGCAAAAGGGGTTGATGTCAAGCCATGCGCTGAGAAATTCGAGAACATGCACAAGTAGAAGATGTGGTGGTAATGCCTCGGATTTTGATAGCGGTTTAAAGAAAACAAGAAGTATACTTTCACCGTTGGCATTGAGTCCCTTAAGCCCATATGTGAGAAGAACATGCGGCCATGCCTCAGACACTGAGAGCAGTTTTAATAAGAAAAGAGGAAGCCTGTCACCATTAGCATTGAGCCCTTTGAGCCCATATGTTAGAAGAACGTCTGGTCATCTCTCGGATTAA 2679 0.4427 MEQLRHIGEVLGSLKALMVLRDEIQINQRQCCLILDTFSLAFDTIADEIKQNLKLEERNTKWKPLEFPLRELCRVFKEGELYIRQCLDSKEWWGKAITLSLNRDCVEFHIHNLLCYFPAVIEAIENAGEVSGLDQDEKLKKKLMLTRKYDNEWNDPKLFQWRFGKQYLVPREICEQLENAWREDRWRLIEALKEKRCSAKVTCTKNEQHLADLLLKKLLNGSEKTNKELWPIAVLLGAKDYQVRRRLGRGKEFKEIQWLGQGFALRHFHGERQAHEAEISTLLSLSHPNILQYLSGFYDEEKKEFSLVIELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGMEYLHSKKIYHGDLNPSNILLKARNSQEGYFQAKVAGFGLSSLKNDESPINEELNPSIWYAPEVLTELEQTGNASSSSKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLSMNTEYQINTELNQLELQSPPVDCCDIETMFLKSFPMERASNLSALSQIPFEMFAYKVAEKGKISQNNTKDKCSEPAKDEPSVSRDENDDQNTVCGGDEIAFIMEDPLPPVTNPRPISGDTQSVCSEAPSKKSVTIKKPTQVKAKTDQGPPKLRVTKSLPPSLSGRILRINKVNQPSMASSPLSPRRRRPSNVTESERNTNINKGSQSPPVSTPFSSVRRKRSEGHVSDSKSSLKLKTRDQSPLTRSSHLTDSIGNFKTKKSQLTSNLSSSPARLRRVNSTDTNLKMQKGLMSSHALRNSRTCTSRRCGGNASDFDSGLKKTRSILSPLALSPLSPYVRRTCGHASDTESSFNKKRGSLSPLALSPLSPYVRRTSGHLSD. 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03083 892 MobiDBLite consensus disorder prediction 577 599 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 731 748 - -
Seca9g03083 892 FunFam Kinase family protein 238 518 - -
Seca9g03083 892 Gene3D Transferase(Phosphotransferase) domain 1 238 532 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 617 789 - -
Seca9g03083 892 SUPERFAMILY Protein kinase-like (PK-like) 239 507 IPR011009 -
Seca9g03083 892 MobiDBLite consensus disorder prediction 749 789 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 856 870 - -
Seca9g03083 892 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Seca9g03083 892 MobiDBLite consensus disorder prediction 854 892 - -
Seca9g03083 892 PANTHER SERINE-THREONINE PROTEIN KINASE 276 510 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 577 605 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 680 730 - -
Seca9g03083 892 MobiDBLite consensus disorder prediction 627 654 - -
Seca9g03083 892 ProSiteProfiles Protein kinase domain profile. 241 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g03083 892 Pfam Protein kinase domain 273 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03083 Seca-Chr9 44372815 44377096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03083 273 505 MAP Kinase Kinase Kinase AT1G62400 32.353 1.22e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Seca9g03083 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03083 - - psat:127120797 1222.22