Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03051 ATGCAAAAGAAGAGCAAGAAGAATGAGAAAAAGATGAAGAGGGTTGAGCATGTGAGAGAAGATGGCGTTAGTGACCCATGGGCATGGCGTAAATATGGACAGAAACCAACAAAGGGATCACCGTATCCACGTAGCTACTATAGGTGCAGCAGCTCCAAAGGATGTTCTGCAAGGAAACAGGTGGAAAGGAGCCATACGGATCCTCAAGTTTTCATAGTTACCTACACCGCAGAACACACCCATCCTCCTCGTCGCAGCAAAAACACAATTGCACCGAACAACACAACAACTCATGATCCACCTGCAGTGGCGGATGTACCAAATACTAATACTGTTGAACTTGAACAGAGGAAAAAAGAGAGCAGGGAAGATGATTGGTTTCCAAGCATTATTGAGCTAGAGGAACTAAACGGCTTCATGGATACTACTTTTGCGGACACTTGGTTCGCCGATCAATGTAATTAA 465 0.4473 MQKKSKKNEKKMKRVEHVREDGVSDPWAWRKYGQKPTKGSPYPRSYYRCSSSKGCSARKQVERSHTDPQVFIVTYTAEHTHPPRRSKNTIAPNNTTTHDPPAVADVPNTNTVELEQRKKESREDDWFPSIIELEELNGFMDTTFADTWFADQCN. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03051 154 MobiDBLite consensus disorder prediction 86 104 - -
Seca9g03051 154 Pfam WRKY DNA -binding domain 25 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g03051 154 SMART WRKY_cls 23 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g03051 154 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 119 IPR044810 GO:0003700
Seca9g03051 154 MobiDBLite consensus disorder prediction 75 109 - -
Seca9g03051 154 ProSiteProfiles WRKY domain profile. 18 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g03051 154 MobiDBLite consensus disorder prediction 1 46 - -
Seca9g03051 154 Gene3D WRKY domain 7 77 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca9g03051 154 SUPERFAMILY WRKY DNA-binding domain 20 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03051 Seca-Chr9 43993192 43994577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03051 4 120 WRKY Transcription Factor Family AT5G52830 54.701 8.02e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca9g03051 WRKY 6.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03051 K13425 - gmx:102667104 125.176