Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03045 ATGCAGAGCTTCAAGTCAAGGGAGTACGTGAGGGAAACCTTCGCTTGGATGCATTATTACTGGTTCCTGACCAACGATGGCATTGAATTCCTCAGGACTTACCTCAATCTTCCATCCGAAATCGTGCCAGCAACTCTGAAGAAGCAAGCCAAGCCTGGTGGCAGATCATTCGGTGGCCCACCCGGTGATCGCCCTAGGGGCCCACCTCGCTTCGACGGAGAGAGGAGATTTGGTGATCGTGATGGATACCGTGGAGGTCCCAGGGGAGGACCTGGTGGCGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACCGGCCTTCTTTCGGGGGTCCTGGTGGAAGACCTGGCTTCGGTCGTGGTTCTGGTGGTTATGGAGCGCCAACTAGTTCAAACATTCCTTAA 405 0.5506 MQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPGGRSFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGSGGYGAPTSSNIP. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03045 134 PANTHER 40S RIBOSOMAL PROTEIN S10 1 128 IPR037447 -
Seca9g03045 134 MobiDBLite consensus disorder prediction 67 83 - -
Seca9g03045 134 Pfam Plectin/S10 domain 1 49 IPR005326 -
Seca9g03045 134 Gene3D - 1 58 IPR036388 -
Seca9g03045 134 MobiDBLite consensus disorder prediction 45 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03045 Seca-Chr9 43955014 43956808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03045 1 107 Cytoplasmic Ribosomal Protein Gene Family AT5G41520 76.636 8.94e-48 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03045 K02947 K09422 gmx:100803556 157.532