Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03036 ATGCGTTCCAAAGAAGCAGAAAAGAGGCGTGCTTTTTTTACCATTGAAGATCTGAAGCAGGTTTTAGATGATACTAATGTGTTACAAATCCGTTGGGAAACTGTGAGTTGTGGTTTCCTATTTGAACAGGCTACCTTAGTTCAAACATTTGGACAGAGGAATCATGCCATTATAAGGTATTGCCCATTATCTATAATTCCTTCTAGAGATTTCTTCTACAAGAGAAACCATGGCCCTGTACCGATAGTTGATGACATAGAAAGGCTTAATGGACAAGCTCCTAACAATAGAATGTCTCTTTTAGTAGTCATTGATGAGAAAACATGTGAAGAAAGGCTTTGGAATATAAAACACCGTGGGGAAACAAACTTTTACTTATGTGAAATCACGATTGCCACTGTGGTGCTGCCAGCTGAAGCTCTTGGCAGGGTACTGGTGTTGGACCTTGCTATCAGAAATGAAGATAGGCTCCCTTGCCGTGAGCTTAGATGGTGTGGGAATTCTGCACATTTGTTGTTGGCTGAAAAGCTAATCTCTGCAAATACAAATACACTAAAAGCAGCTTTTGATTCTGCAATTAATCGATATAGACCAAAGGTGATTAAGGCACTTCAAAAAGAAAGATGGTCAACTTCAGTAGATAGTAGATTAAATTCTCATAATCCTGGCTTGATATCACAAGCCTCTGATCTTTCAGAGATTGCAGAATCACCAAGATCCAATGACACTAGCCTCAAAAGTCAAACATCAGGAGAAGCATTGTCTTTTGACCTTAACATTGTAGCCATTGATTCTGGTGTTCGTCAACGACCCCCTAATGGAAAACGTGCAAATGATCAGGTTAATTACCTGAAGTTGGTTGAGTTGTTGATCAATTGTTCTGAGTATGCCTTAAACCTCTTATATGATATAATTGAAGGGAAATTAGGATGTCCTCCACCAGAAGAAATGAGTATGTCCCCCCAGGCGCTCATGGCGTGA 981 0.3986 MRSKEAEKRRAFFTIEDLKQVLDDTNVLQIRWETVSCGFLFEQATLVQTFGQRNHAIIRYCPLSIIPSRDFFYKRNHGPVPIVDDIERLNGQAPNNRMSLLVVIDEKTCEERLWNIKHRGETNFYLCEITIATVVLPAEALGRVLVLDLAIRNEDRLPCRELRWCGNSAHLLLAEKLISANTNTLKAAFDSAINRYRPKVIKALQKERWSTSVDSRLNSHNPGLISQASDLSEIAESPRSNDTSLKSQTSGEALSFDLNIVAIDSGVRQRPPNGKRANDQVNYLKLVELLINCSEYALNLLYDIIEGKLGCPPPEEMSMSPQALMA. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03036 326 Pfam Actin-fragmin kinase, catalytic 139 245 IPR015275 -
Seca9g03036 326 Gene3D - 137 295 IPR036940 -
Seca9g03036 326 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 138 321 IPR035010 GO:0004721|GO:0009737|GO:0043622
Seca9g03036 326 SUPERFAMILY Protein kinase-like (PK-like) 138 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03036 Seca-Chr9 43875314 43879237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03036 141 316 Protein tyrosine phosphatase (PTP) family AT5G23720 55.801 5.80e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03036 K14165 - gmx:100799468 265.003