Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03033 ATGGAAAAATTTGGTGATGAATCATTTATTAATTTAGATTATGATAGAGACGTGAACAACAGTTATAGTGATAGAGGCAATGATAGTTCTGATGAAAGTCATAGTCAAGATAACAATGATGTGGGTAATCAGAATGAGGCAATGGATGATGATTTAACATATGAACAGTATAAAAGTATAATAGACCTAACTGCGAATGACATCCGAGGTATGGAATTTGGTAGTGAAGAGCATGCATGTAATTTTTATGATTCATATGCTAGGTGTCATGGCTTTGTTGCAAGAAAAGATGATATAAAACGTGATGCGGAAGGCCATATTATAGTGCGTCAATTGGTTTGCAACAAAGAGGGTTTGAGAAATAAAAAGCACTTTATAAGGTTGGATAGAAAGAGACCTCATAGGCCAATCACTCGTACTAATTGTCAAGCTAAGCTTAGAGTACACTTTGATTACAAGAGATCAAAATGGACAGTCTTGTCCTTTGTGGAGACTCATAATCATTATTTATGTCCACCAAAATATAGACACTTAATCCCTGCATAA 546 0.3462 MEKFGDESFINLDYDRDVNNSYSDRGNDSSDESHSQDNNDVGNQNEAMDDDLTYEQYKSIIDLTANDIRGMEFGSEEHACNFYDSYARCHGFVARKDDIKRDAEGHIIVRQLVCNKEGLRNKKHFIRLDRKRPHRPITRTNCQAKLRVHFDYKRSKWTVLSFVETHNHYLCPPKYRHLIPA. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03033 181 MobiDBLite consensus disorder prediction 15 35 - -
Seca9g03033 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 174 - -
Seca9g03033 181 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Seca9g03033 181 MobiDBLite consensus disorder prediction 15 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03033 Seca-Chr9 43858834 43859379 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g03033 FAR1 3.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03033 - - ccaj:109792835 192.586