Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g03028 ATGTCTTCTGATCTCTATACTTTTGATATTTCTTTCTACAAACATTCAAGCCCAGACTTTGTCTCCTATGAGTATGATGGAACCGGAGGCCTTCTCTTTTTCTCTGATCCTTACCCTTTCCCTCCCATTGATGTACCTCAAGGGAATTTGCTAATTAACAATTCTCCTGACACGTTTTCCTCTTCTTTCTTTTCTTTTTCTCCTCCAAGTACTCATCTGGAAAACCATAACCTCTATCCTGAGGCTAACACTATACAGCCTCTGACAAATATAAAAACTGAGTTTGGAAAATTCCCTCCTGCTCTGGATGAATCTGGAGTGAAAAGCGACGAGGAATGCCAAATAGGTTTGGATTATACCTACAATTACAATCACCACTTTGTTCCTGAAAATGCATCCAAGTTGATGCAGAGGAGCTACAGCTGTAACTCTTTTGATGGAAAGCCTGATACTTCTCCCTTTGAAGCTCACCTTGCAGACACTCTCATGGACTCCCCAAATTTTCAATGGCATACCCCTCAAAACAGTTTCCTCAATGCAGAAATGAGGAGGGTGTGCAGTGCAGGAGACTTGCAGAACATGAAAGCAACACATACGTCTCCTCAAACAGAGATGGAGGAAGCAAACTTCAAAGTAGGGCGTTATAGTGCCGAAGAAAGAAAAGAAAAAATTTCTAAATACAGAGCCAAGAGAAGTCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACACGCATACGTGGCAGATTCGCGCGTAACGACGAAACCAGCGAGATACCGAAAGCGCCATGTTCAACCGCAGAAGAATACGAAGACGAGTTCTGGGTTGAGTTCATTAAAGGGCTCAGTTAG 879 0.4255 MSSDLYTFDISFYKHSSPDFVSYEYDGTGGLLFFSDPYPFPPIDVPQGNLLINNSPDTFSSSFFSFSPPSTHLENHNLYPEANTIQPLTNIKTEFGKFPPALDESGVKSDEECQIGLDYTYNYNHHFVPENASKLMQRSYSCNSFDGKPDTSPFEAHLADTLMDSPNFQWHTPQNSFLNAEMRRVCSAGDLQNMKATHTSPQTEMEEANFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDETSEIPKAPCSTAEEYEDEFWVEFIKGLS. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g03028 292 ProSiteProfiles CCT domain profile. 220 262 IPR010402 GO:0005515
Seca9g03028 292 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 124 274 IPR045281 GO:0009909
Seca9g03028 292 Pfam CCT motif 220 262 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g03028 Seca-Chr9 43818241 43819775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g03028 216 267 C2C2-CO-like Transcription Factor Family AT5G24930 48.077 8.61e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca9g03028 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g03028 - - gmx:100786853 326.25