Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g03008 | ATGAAGACCCATATAAAGTCAACCGATTGGAATACGATGGAATCCGATCCTTGTAACTGGTTTGGCGTCTCATGCACTGTGGCTCGAGATCATGTCATCAAGCTAAACATTTCAGGTTCTTCATTAAAGGGGTTTCTTGCACCAGAGTTAGGGCAAATCACTTATTTGCAAGAACTAATTTTGCACGGAAACAATCTCATTGGAATAATACCTAAAGAGTTATGCACGTTGAAATCTCTCCAGGTGTTGGATTTGGGAATGAATCGGCTATCAGGACCAATTCCTCCAGAGATTGGAAATTTAACCTTACTAGTGAAGATAAACCTGCAGTCCAACGGGTTGACTGGTAGGCTACCTCTGGAGTTAGGAAATTTGAGATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAGGGACCTGTTCCTGCTGGTGACAGTACTAATTTTGTTTCAAATATACATGGAATGTATGCATCAAAGGAGAATGTAACTGGTTTCTGCCGTTCGTCTCAGTTAAAAGTAGCAGACTTTTCATATAATTTTTTTGTTGGTAGCATACCTAAATGCTTGGAGTATCTTCCGAGGTTAAGCTTTCAAAGGAACTGCCTCCAGAGCAAAGACTTAAACCAGCGGCCTTCCATACAATGTGTGAACTATTATTTCATAGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAACCCGAACCACCAACCTGCTGAATATTTGTCCAAGCATCACGGAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTAACGGGAACTATGGTCGGTTCTCTCTTTCTGGTTGCTGTTCTCGCCGCTTTTCAGAGATGTAACAATAAATCATCTATCATTATTCCTTGGAAAAAATCTGCGAGCCAGAAAGATCATAACACAGTATATATAGACCCTGAGATGTTAAAGGATGTGAGAAGGTATAGTAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGGCCTGAAATTGCCGTAATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTGGCAGAATTGGCAAGGTTAAATCATGAGAATACTGGAAAACTACTGGGATATTGCAGAGAGAGCACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGAGAACCTACATTATGAAGAAGGATGCCAGTTCTCTTGGACAAGGCGTATGAATATTGCTATAGGCATTGCACGTGGACTCAAGTATTTGCACACAGAAGTTGAGCCTCCATTCACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTAGCAGTCAAGGTGCTGTTTGTGTTCTTCCAAACTCCCTGGAGGCGCGCCATCTTGATACCCAAGGAAACATATATGCTTTTGGGGTACTTCTGCTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTATCTTGAAATGCCAGAAGTAATGTCACATTTGGTGGATCCCGAATTGAAACATTTTAGATATGATGACCTCAAAGTTATATGCGAGGTAATAACTCTTTGTATCAATCGTGATTCAACTACGCGTCCATCTATGCGAGAATTATGCAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCATAA | 1881 | 0.42 | MKTHIKSTDWNTMESDPCNWFGVSCTVARDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNNLIGIIPKELCTLKSLQVLDLGMNRLSGPIPPEIGNLTLLVKINLQSNGLTGRLPLELGNLRYLQELRLDRNKLQGPVPAGDSTNFVSNIHGMYASKENVTGFCRSSQLKVADFSYNFFVGSIPKCLEYLPRLSFQRNCLQSKDLNQRPSIQCVNYYFIAGASPAKSQPVVNPNHQPAEYLSKHHGASKPAWLLALEIVTGTMVGSLFLVAVLAAFQRCNNKSSIIIPWKKSASQKDHNTVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENTGKLLGYCRESTPFTRMLVFDYASNGTLHENLHYEEGCQFSWTRRMNIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSISSQGAVCVLPNSLEARHLDTQGNIYAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPEVMSHLVDPELKHFRYDDLKVICEVITLCINRDSTTRPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS. | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g03008 | 626 | PANTHER | PROTEIN MALE DISCOVERER 2 | 7 | 626 | - | - | |
Seca9g03008 | 626 | Pfam | Leucine rich repeat N-terminal domain | 7 | 25 | IPR013210 | - | |
Seca9g03008 | 626 | Gene3D | Phosphorylase Kinase; domain 1 | 300 | 409 | - | - | |
Seca9g03008 | 626 | FunFam | Nuclear pore complex protein NUP107 | 1 | 144 | - | - | |
Seca9g03008 | 626 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 302 | 409 | - | - | |
Seca9g03008 | 626 | ProSiteProfiles | Protein kinase domain profile. | 328 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g03008 | 626 | Gene3D | Ribonuclease Inhibitor | 105 | 210 | IPR032675 | - | |
Seca9g03008 | 626 | Gene3D | Ribonuclease Inhibitor | 2 | 104 | IPR032675 | - | |
Seca9g03008 | 626 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 600 | IPR001245 | GO:0004672|GO:0006468 | |
Seca9g03008 | 626 | SUPERFAMILY | Protein kinase-like (PK-like) | 305 | 601 | IPR011009 | - | |
Seca9g03008 | 626 | SUPERFAMILY | L domain-like | 7 | 198 | - | - | |
Seca9g03008 | 626 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 616 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g03008 | Seca-Chr9 | 43629464 | 43634477 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g03008 | 9 | 601 | Receptor kinase-like Gene Family | AT2G01210 | 27.713 | 3.28e-51 | 186 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Seca9g03008 | PK_Tyr_Ser-Thr | 1.8e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g03008 | - | - | gmx:100794714 | 1081.63 |