Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02977 ATGGAGTTTGATACAAAAGATCATGCATATAGATTTTACAATATGTATGCTGGCTTCATTGGTTTTAGTATTAGAAAAGATTGGAGAAATAAAAGCAAATTAGATAAGGAGATCGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAAGGTTAAAGGCCATGAAGGAAAAATGACCCGTAAAGATATTAGAACTGGATGTTTAGCACACATGGTCATTGGTCGACAATCAAGTGGAAAATATGTCGTCACATCTTTTGTAAAAGACCATAATCATGAGCTTGCAACCCCCAAGAGTAGGCATAAATTACCATCACAAAGAAGGGTTTCTATCGCTCAAGCAGCTGAAGTTGAAATGGCGAATCGTTCTGGTATGTATTTAATTTGTTTATGTTTATACAATTTTAGCCTTATATGTATTTAA 432 0.3356 MEFDTKDHAYRFYNMYAGFIGFSIRKDWRNKSKLDKEIVISRKFVCFKEGFKKVKGHEGKMTRKDIRTGCLAHMVIGRQSSGKYVVTSFVKDHNHELATPKSRHKLPSQRRVSIAQAAEVEMANRSGMYLICLCLYNFSLICI. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02977 143 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 118 - -
Seca9g02977 143 Pfam FAR1 DNA-binding domain 11 98 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02977 Seca-Chr9 43188339 43188770 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g02977 FAR1 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02977 K17604 - tpra:123914859 222.246