Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02956 ATGATTGTTGTCAACTCACCACCCTTAGGCTTTAGTACCTTTGCTGTTGCTCATGTTCTACCTGCTGTGCATTTGAGTTATAATGCTGGCTTGGCTATCAAAGCTTACATAAACTCAACCTACAAACCCACAGCAACAGTGCTATTCAAAGGAACTGTAATTGGTGATTCACTTGCTCCTACAGTTGTTTCATTTTCTTCAAGGGGTCCAAGCCAGGAAAGCCCTGGAATTCTTAAACCTGACATCATTGGACCTGGAGTGAACATTCTAGCTGCATGGGCTGTGTCTATAGACAACAAAATCCCAGCATATGATATTGTTTCAGCTGACGTGTTTGCCACTGGTGCAGGACATGTTAACCCTCTCAGAGCAAGTGATCCAGGGCTTGTTTATGATATCCAGCCTGAGGATTACATTCCTTATTTGTGTGGTTTGGGTTACTCAGACAGAGAAATTTCAATTCTTGTGCAGAGGAGAGTGAGATGCTCCTATTTCTACACCAGAACGTTGACAAATGTTGGACCTGCCAGATCAACTTACAAGGTGAGACTTGAGGTGCCTTTGGCGTTGGGTATGAGCGTGAACCCAACTCAGATAACGTTCACGGAGGTGAACCAGAAGATTACATACTCAGTGGAGTTTATCCCAGAAATCAAAGAAAATAGAGGCAACCATACTTTCACTCAAGGCTCTCTCACGTGGGTATCGGACACTCACGCTGTTAGGATCCCCATATCGGTCATCTTCAATGCGGCAAAGGATAGACATTACACGTCAATTGAGGAAGTGGAAGATCAAAGCAACTTATTGACTTACATTGTTCATGTTAGAAAGCCTCAGCCTCTGCAGTCTGAGAATTTGCATGGCTGGTACCATTCTCTCCTGCCAGCTAGCACAAAAACTCAGAACCAACAGCGCATCATTTTCTCATACAAAAACATCTTGGATGGATTTGCTGTCAAATTGACCCCTGAAGAGGCCAAAGCTCTTGAAGACAAAGAGGAGGTGGTGTCAGCCCGCCCTGAAAAGATCCTCTCTTTACACACAACTCACACTCCAAGTTTCTTGGGGTTACAACAGGGACTTGGACTATGGAAAGGTTCCAATTTAGGAGAAGGAATAATAATTGGAATCTTGGACACAGGGATATACCCTTTCCATCCTTCCTTTTCTGATGAAGGAATGCCATCTCCACCACCAAAATGGAAAGGCCACTGTGAATTCACAGGGAGAAGGACTTGTAACAACAAGCTCATTGGTGCAAGGAATTTCGTCAAAACCACAAACAATCAATCCCTTCCATTCGATGATGTTGGTCATGGAACTCACACAGCCAGCACTGCCGCTGGAAGACCAGTACAAGGTGCTAATGTCTATGGCAATGCTAAGGGAACAGCTTCTGGCATGGCACCTAATGCACACTTAGCAATTTACAAGGTTTGCAGCCTCTATGGTTGTTCTGAGAGTGCAATATTAGCTGGAATGGATGTTGCTGTTGATGATGGCGTTGATATACTTTCTCTCTCTCTTGGTGGACCCTCTGCTCCTTTCTTTGATGATCCAATTGCACTCGGTGCATTTGGTGCAATTCAGAAGGGAATTTTCGTTAGTTGCTCAGCTGCTAATGCTGGTCCCTTTTATGGTTCATTGTCTAATGAGGCTCCTTGGATTCTCACCGTTGGTGCCAGCACCATTGACAGAAAAATAATGGCAATAGCAAAGCTTGGCAATGGGAGAGAATATATTGGGGAATCTGTGTTCCAACCCAAGGACTTTGCACCCATGTTATTGCCACTTGTGTATGCTGGTGCAAATGGATCAAGTGACTCTGTCTTTTGTGCTCCTGAATCCTTGGAGAATGTGGATGTTAAGGGAAAGGTGGTGTTGTGTGAACAAGGTGGATTTGTTCCAAGAGTAGCCAAGGGGAAAGCTGTTAAGGATGCTGGTGGTGCTGCCATGATCCTCGTGAACAGTGAGCTTGAAGCCTTCAATCCCATTGCTGATGTTCATGTTCTCCCTGTTGTGCATGTGAGTTATGTTGCCGGGTTAGCCATCAAAGATTATATAAACTCAACTATAGCACCAACAGCCACAATTTTGTTTGAAGGAACTGTTATTGGAAACCCACTTGCTCCTGCAGTTGCTTCCTTTTCTTCTAGAGGTCCAAGCAAAGCAAGCAGAGGAATTCTGAAACCAGACATAATTGGACCAGGAGTGAACATTCTAGCTGCATGGCCTGTGTCTTTGGATAATAACACCCCACCATTCAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCTTTGTTGAAAAACTCTCATCCAGATTGGTCCCCTGCTGCCATAAAGTCAGCAATCATGACCACTGCTTATGGGGTGAATCTTGAAGGCAAGCCTATTTTGGACCAAACTCTTCAACCTGCAGATGTGTTTGCCATTGGTGCTGGACACGTCAACCCTTCAAAAGCAAATGATCCAGGCCTTATTTATGATATACAACCAAATGATTACATTCCTTATTTGTGTGGTTTGGGCTACACTGACAGACAAGTTGGAATTATTTTGCAACACAAAGTGAGATGCTTGGAGTTAAAACCTATAGCAGAAGCACAACTCAATTATCCCTCATTTTCTATTCTGTTGGGGAACACTTCACAGTTCTACACCAGAACACTGACAAATGTGGGACCAGTCAACACAACTTACTCTGTGGAAATTGATGTGCCTCTGGCTGTAGGTATGAGCATAAGCCCTGCTAGAATTACATTCACTAAGGTGAAGCAGAAGGTTACATACTATGTTGGTTTTATACCTGAAGACAGAGAGAATAGAGGCAATCACATGTTTGCTCAGGGGGCTATTAAGTGGGTATCTGAAAAATACTCTGTCAGCATCCCTGTATCTGTCATCTTTCGGTGA 2937 0.4392 MIVVNSPPLGFSTFAVAHVLPAVHLSYNAGLAIKAYINSTYKPTATVLFKGTVIGDSLAPTVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAVSIDNKIPAYDIVSADVFATGAGHVNPLRASDPGLVYDIQPEDYIPYLCGLGYSDREISILVQRRVRCSYFYTRTLTNVGPARSTYKVRLEVPLALGMSVNPTQITFTEVNQKITYSVEFIPEIKENRGNHTFTQGSLTWVSDTHAVRIPISVIFNAAKDRHYTSIEEVEDQSNLLTYIVHVRKPQPLQSENLHGWYHSLLPASTKTQNQQRIIFSYKNILDGFAVKLTPEEAKALEDKEEVVSARPEKILSLHTTHTPSFLGLQQGLGLWKGSNLGEGIIIGILDTGIYPFHPSFSDEGMPSPPPKWKGHCEFTGRRTCNNKLIGARNFVKTTNNQSLPFDDVGHGTHTASTAAGRPVQGANVYGNAKGTASGMAPNAHLAIYKVCSLYGCSESAILAGMDVAVDDGVDILSLSLGGPSAPFFDDPIALGAFGAIQKGIFVSCSAANAGPFYGSLSNEAPWILTVGASTIDRKIMAIAKLGNGREYIGESVFQPKDFAPMLLPLVYAGANGSSDSVFCAPESLENVDVKGKVVLCEQGGFVPRVAKGKAVKDAGGAAMILVNSELEAFNPIADVHVLPVVHVSYVAGLAIKDYINSTIAPTATILFEGTVIGNPLAPAVASFSSRGPSKASRGILKPDIIGPGVNILAAWPVSLDNNTPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTAYGVNLEGKPILDQTLQPADVFAIGAGHVNPSKANDPGLIYDIQPNDYIPYLCGLGYTDRQVGIILQHKVRCLELKPIAEAQLNYPSFSILLGNTSQFYTRTLTNVGPVNTTYSVEIDVPLAVGMSISPARITFTKVKQKVTYYVGFIPEDRENRGNHMFAQGAIKWVSEKYSVSIPVSVIFR. 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02956 978 FunFam Subtilisin-like protease SBT1.5 373 608 - -
Seca9g02956 978 Pfam Fibronectin type-III domain 152 247 IPR041469 -
Seca9g02956 978 Pfam Fibronectin type-III domain 877 975 IPR041469 -
Seca9g02956 978 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 255 348 IPR037045 -
Seca9g02956 978 FunFam subtilisin-like protease SBT1.5 566 706 - -
Seca9g02956 978 Gene3D - 847 976 - -
Seca9g02956 978 Pfam Subtilase family 371 804 IPR000209 GO:0006508|GO:0008236
Seca9g02956 978 Pfam PA domain 598 685 IPR003137 -
Seca9g02956 978 Gene3D - 151 251 - -
Seca9g02956 978 CDD Peptidases_S8_3 347 797 IPR034197 -
Seca9g02956 978 Gene3D Peptidase S8/S53 domain 373 843 IPR036852 GO:0004252|GO:0006508
Seca9g02956 978 ProSiteProfiles Serine proteases, subtilase domain profile. 355 830 - -
Seca9g02956 978 CDD PA_subtilisin_like 574 699 - -
Seca9g02956 978 CDD PA_subtilisin_like 1 47 - -
Seca9g02956 978 Gene3D Peptidase S8/S53 domain 23 141 IPR036852 GO:0004252|GO:0006508
Seca9g02956 978 Pfam Peptidase inhibitor I9 271 348 IPR010259 -
Seca9g02956 978 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 108 IPR045051 -
Seca9g02956 978 SUPERFAMILY Subtilisin-like 60 186 IPR036852 GO:0004252|GO:0006508
Seca9g02956 978 Gene3D - 566 706 - -
Seca9g02956 978 SUPERFAMILY Subtilisin-like 347 834 IPR036852 GO:0004252|GO:0006508
Seca9g02956 978 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 376 387 IPR023827 -
Seca9g02956 978 PRINTS Subtilisin serine protease family (S8) signature 371 390 IPR015500 -
Seca9g02956 978 PRINTS Subtilisin serine protease family (S8) signature 760 776 IPR015500 -
Seca9g02956 978 PRINTS Subtilisin serine protease family (S8) signature 436 449 IPR015500 -
Seca9g02956 978 SUPERFAMILY PA domain 598 719 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02956 Seca-Chr9 42992489 42997202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02956 306 978 Subtilisin-like Serine Gene Family AT1G04110 46.186 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02956 - - lja:Lj2g3v2002920.1 1133.63