Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02913 ATGGCAGCTAGACTGGGGCTCTCATTACTGGTTCTCATGAACCTTGTCATTTACATGGCTGGCACAGCAGAATCCGCCGTTACCAACCGTAACCCAGCAGACTTCATCAAGTCCTCATGCAGGGCCACTCGCTACCCTGTTTTATGCGTTCAATGTCTCTTGGGGTATGCGAGCGTGATTCGCCAAAGTGAGCGACAACTAGCCATGGCTGCTTTATCAGTGAGCATATCCAGGACCCGATCGAGTGCATCATTTGTGAAGAAGATATCCAAAGCAAGGGGCATGAAGCCTAGGGAGTACAGAGCTGTACAAGACTGCATAGAGAACATAGGTGACAGTGTGGACCGTCTTAGCCAATCAGTTAAGGAGTTAGGCCGTACCGGTGAGGCCGTGGGAGAGGACTTCGTATGGCACATGAGCAACGTCCAAACTTGGGTTAGTGCTGCTCTCACCGATGACAATACTTGTCTTGATGGCTTTGCTGGTTCTGGCATGAATGGAAACGTGAAGACTGCCATCAAGAACAGGATCGTCAGTGTTGCTCAAGTCACCAGCAATGCGCTCGCATTGGTTAATCGCTTTGCCTCAAGGCACCCTCACCCACACGCTCAAACTGATCATACCGATTCTCCTTAA 636 0.5031 MAARLGLSLLVLMNLVIYMAGTAESAVTNRNPADFIKSSCRATRYPVLCVQCLLGYASVIRQSERQLAMAALSVSISRTRSSASFVKKISKARGMKPREYRAVQDCIENIGDSVDRLSQSVKELGRTGEAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFAGSGMNGNVKTAIKNRIVSVAQVTSNALALVNRFASRHPHPHAQTDHTDSP. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02913 211 CDD PMEI-like_3 38 196 - -
Seca9g02913 211 Pfam Plant invertase/pectin methylesterase inhibitor 34 190 IPR006501 GO:0004857
Seca9g02913 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 194 IPR035513 -
Seca9g02913 211 FunFam Pectin methylesterase inhibitor 1 31 194 - -
Seca9g02913 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 190 - -
Seca9g02913 211 SMART PMEI_2 31 190 IPR006501 GO:0004857
Seca9g02913 211 NCBIfam pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Seca9g02913 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 194 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02913 Seca-Chr9 42644677 42645312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02913 36 191 Carbohydrate Esterase AT3G14310 32.704 2.52e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02913 - - psat:127120659 305.064