Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02899 ATGATGGCATTAACATTTAAAATTCCCTTAAAGCGATTACAAACAGAAATGAACAAATTGTTCATTTCATTTGACCCTTCCCTTCATGGAATTGAAGCTCGTGGCTTTATTTTTGGTCCTCCCATTGCACTGGCAATAGGAACAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGCAAAGTTATTTCTCAAGAATACATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAAGCTGGTGAGCGTGCTATAGTGGTTGATGATTTGATTGCTACTGGCGGAACGCTCTGTGCAGCTATGGACTTACTAGAGCGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAATTACCAGAATTGAAGGGTCGTGAACGTTTGAACGGGAAGCCCTTGTATGTGTTGGTGGAATATTTTGACATTTGA 450 0.4178 MMALTFKIPLKRLQTEMNKLFISFDPSLHGIEARGFIFGPPIALAIGTKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERAIVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYFDI. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02899 149 CDD PRTases_typeI 28 145 IPR000836 -
Seca9g02899 149 FunFam Adenine phosphoribosyltransferase 3 148 - -
Seca9g02899 149 Gene3D - 10 147 IPR029057 -
Seca9g02899 149 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 29 145 - -
Seca9g02899 149 Pfam Phosphoribosyl transferase domain 29 132 IPR000836 -
Seca9g02899 149 SUPERFAMILY PRTase-like 28 140 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02899 Seca-Chr9 42527679 42531450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02899 28 145 PRT Gene Family AT1G27450 77.119 8.53e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02899 K00759 - gmx:100306411 233.032