Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02884 ATGCAGTGTGACTTTTCCATGTCCATGATGGCACGTTCGAAGTTCTACAAGAAGCCATCTTTGTTTATTATCGAATATAATCCTGATATGGCTCTCTGTTTTTTACCTGGGATTTTTTCAAAGGTCTTTAAAGAAGATGTTCCGAGGAGAGTTGTCCTTCGTGATCCTTATCAAAATTTAATTCATCTGGTCGTTCGGAGGGATGTGGATGATCTTCTATTCACTCATGGTTGGACAATGTTGAAAGATATATATGATGATCTTAGTGATGGGGGATGGTTGAAGTTTAACTATGTTGGTGGAAATGAGTTTGACATTAAAGTGATGCACAGGTGGTTAGGTGAAGTAAATTACCCAGTTCTTGGGAAGGAATATAAGCATGAAATAGAATATCTTCCTGAGGAAGTTATCCCTGGGTACAAGGTACAACATGCAGATGATTTTCACTACGTAGACAAGAAGATGACGGATTACCTTTGTTCCAATCATTTGCTGAATCTGTCGTCTGCCCTTTGTAAACGATTTAGAGGAAGACCAACCAATTGTTGTTTGAAGGATGTAGATGGAGTTGTTACACCTATTACTTTGAAGTGGGGAAAGAAAGGACATATTGCATACATTACAAGAGGATGGAGGCAGTTTTGTTCTGCAGGAAATTTGAAAAAAGATTCAATTGTCAGATTTAGGGTTGATCCTGACGATTCTAATACAATTTATGTTAGGATTATTGAAGATATTCCAACAATTTAG 750 0.3733 MQCDFSMSMMARSKFYKKPSLFIIEYNPDMALCFLPGIFSKVFKEDVPRRVVLRDPYQNLIHLVVRRDVDDLLFTHGWTMLKDIYDDLSDGGWLKFNYVGGNEFDIKVMHRWLGEVNYPVLGKEYKHEIEYLPEEVIPGYKVQHADDFHYVDKKMTDYLCSNHLLNLSSALCKRFRGRPTNCCLKDVDGVVTPITLKWGKKGHIAYITRGWRQFCSAGNLKKDSIVRFRVDPDDSNTIYVRIIEDIPTI. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02884 249 Gene3D - 142 245 IPR015300 -
Seca9g02884 249 SUPERFAMILY DNA-binding pseudobarrel domain 146 242 IPR015300 -
Seca9g02884 249 Pfam B3 DNA binding domain 154 244 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02884 Seca-Chr9 42357258 42358363 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca9g02884 B3 3.1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02884 - K05725 tpra:123886137 57.7658