Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02879 ATGGTTCAGGATTGCGTGCTACATTCAATAGCAACAAGGTTCGGATCCATAGCAGCCCACGATAGGAAACAACCAAAGGAGAAGACAGGGTTTGCATTCGTACGATGCAGGGTGACAGGTACAGGGCCGGTGTATGTGGGGAGAGCAATGGGGCAGTACTCAAGAATTGTCTATGCATACACATATTTCGATGACATTGTTGCACACGGCGGTTGGGATGATTGGGACCATGCCAACAACAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCAGTGCGTGGGGTCTCATGGGCACGAGAGTTAGATTTCGAGTCAGCACATCCATTTCTAGTAAAGAGCTTCGTCAATGGGAGACACTGGATAGCACCCACTGATGCTTAG 405 0.4963 MVQDCVLHSIATRFGSIAAHDRKQPKEKTGFAFVRCRVTGTGPVYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPTDA. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02879 134 Gene3D - 1 134 IPR012334 -
Seca9g02879 134 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 130 - -
Seca9g02879 134 Pfam Pectinesterase 10 125 IPR000070 GO:0030599|GO:0042545
Seca9g02879 134 SUPERFAMILY Pectin lyase-like 2 132 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02879 Seca-Chr9 42301104 42302310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02879 1 134 Carbohydrate Esterase AT5G47500 81.343 1.94e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02879 - - cam:101501763 274.633