Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02878 AAGGTTCACGGATCACTTGCTCGTGCCGGAAAAGTGAGAGGCCAAACGCCGAAAGTGGCGAAGCAAGACAAGAAGAAGAAGCCCCGTGGCCGTGCCCACAAGCGCATGCAGTACAACCGCCGATTCGTCACCGCAGTAGTGGGATTCGGCAAGAAGAGGGGACCCAACTCATCTGAGAAGTGA 183 0.5628 KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK. 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02878 60 MobiDBLite consensus disorder prediction 1 37 - -
Seca9g02878 60 MobiDBLite consensus disorder prediction 20 37 - -
Seca9g02878 60 Pfam Ribosomal protein S30 1 57 IPR006846 GO:0003735|GO:0005840|GO:0006412
Seca9g02878 60 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02878 Seca-Chr9 42295092 42295411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02878 1 60 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.667 5.22e-29 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02878 K02983 - dcr:108209471 114.39