Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02875 ATGGGGGTGATGGAAGATGTAGCACTAATTGGAGGATTGATAGGAGTTCAATTCATCTACGCAGGGAACGCTTTGCTGATGGGTTATTCTATGTCATTGGGCCTCACCCCTCTTACCATTATCATTTTAACTTCCCTGGCTACATTCCTTATTCTCTTCCCCCTTGCCTTTTGTTTTGAAAGGAGGAAGTGGCCCAAGAATTACAGTTTAAAGTTGATTATACAGCTATTGTTTCTTTCATTTGGAGGATTAGCTTTCCAGTCTTTATTCCTCAAAGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCATCATCGCATGGACTTTTGGGTTAGAGAAAGTCAACTTAAGCAACAAGCATAGTCAAGTAAAAATCTTTGGAACATTGCTCTGTGTCGTGGGCGCTCTTACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCGAGAAACAGGCTACAGTTCAATTATCATCAACACCATCAGCTTTTATCTTTGACATGCAGAAGATAAACGGTTGCCTCTATCTCATGGCTTCAGTCTTAATATTGTCAAGCAGCATTGTCTTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCAATGTCCTTGAGCGCAATCACGTCCTTGCTAGGGGGGTTGATGACTGCAATCGTTCAGTTACTTGAAGATCACGAGCTGAAAAGTGGTTGGCAACTTGTGAATTTTAGAGACCTGATTGGCTATTCTTTTCTGGTAGGTGCAATGAGTGGAATATGCCTAAGCTTCAACGGGTGGGCACTTAAGAAGAGAGGGCCAGTCTTTGTCTCCATGTTCAACCCCATTGGAACAGTATGCTCCGTCATTTTCTCCGTCGTTACCTTAGGAGATACTATTAATATTGGAAGCCTTGCAGGTATGTTCCTCATGTTCACTGGACTCTACTTAGTTCTTTGGGCCAAAGGCAAAGAAGGATATGCAGATCATGGAGGTGTCTTAGAGAGTGAGTTTGATGCAGACAGGCCTCTTTTATCTTGA 1050 0.4314 MGVMEDVALIGGLIGVQFIYAGNALLMGYSMSLGLTPLTIIILTSLATFLILFPLAFCFERRKWPKNYSLKLIIQLLFLSFGGLAFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWTFGLEKVNLSNKHSQVKIFGTLLCVVGALTMSIMQSISAPATEKQATVQLSSTPSAFIFDMQKINGCLYLMASVLILSSSIVLQAFALGDFPAPMSLSAITSLLGGLMTAIVQLLEDHELKSGWQLVNFRDLIGYSFLVGAMSGICLSFNGWALKKRGPVFVSMFNPIGTVCSVIFSVVTLGDTINIGSLAGMFLMFTGLYLVLWAKGKEGYADHGGVLESEFDADRPLLS. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02875 349 Pfam EamA-like transporter family 14 149 IPR000620 GO:0016020
Seca9g02875 349 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Seca9g02875 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 151 - -
Seca9g02875 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Seca9g02875 349 PANTHER WAT1-RELATED PROTEIN 13 329 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02875 Seca-Chr9 42259173 42264016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02875 4 332 Nodulin-like Gene Family AT5G47470 58.006 3.14e-134 386