Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02848 ATGACGGTTGAAAAGGAAGACTTGGGTCTGAGTCTAAGCTTGAGCTTCCCTCAAAATCCCCCAAATCCCCTGCATCTCAACCTCATGTCCTCTTCTGCTTACTCCTCTTCTCCTTCTGGGCACAAACCTTCTTGGAACGAGCCTTTCACTTCTTCAGATCGAGATTCAGAAACATGCAGAGGAGGCGAAGGTCGATCATTACTTGGCGGAATCGATGTGAACCGGTTACCTGCAGGGGTTGAGTGTGAAGAAGAAGCAGGAGTTTCATCTCCAAACAGCACGGTTTCAAGCGTGAGTGGTAAACGAAGCGAGAGAGAAACGAACGGTGAAGAGCGTGACATGGAGAGAGATTGTTCCAGAGGGATCAGTGATGAAGAAGACGGTGAAACCTCAAGGAAAAAACTTAGACTCACCAAAGACCAATCCATTATTCTCGAAGAGAGCTTTAAAGAGCACAATACTCTTAACCCCGTAAGTACCACACCACTACCATGCAGTTAG 501 0.4711 MTVEKEDLGLSLSLSFPQNPPNPLHLNLMSSSAYSSSPSGHKPSWNEPFTSSDRDSETCRGGEGRSLLGGIDVNRLPAGVECEEEAGVSSPNSTVSSVSGKRSERETNGEERDMERDCSRGISDEEDGETSRKKLRLTKDQSIILEESFKEHNTLNPVSTTPLPCS. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02848 166 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 158 - -
Seca9g02848 166 MobiDBLite consensus disorder prediction 87 102 - -
Seca9g02848 166 Pfam HD-ZIP protein N terminus 3 106 IPR006712 GO:0005634
Seca9g02848 166 MobiDBLite consensus disorder prediction 103 134 - -
Seca9g02848 166 MobiDBLite consensus disorder prediction 12 52 - -
Seca9g02848 166 MobiDBLite consensus disorder prediction 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02848 Seca-Chr9 42018805 42020509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02848 1 157 Homeobox Transcription Factor Family AT5G47370 52.353 9.93e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02848 K09338 - gmx:100787231 216.468